| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0658 |
|---|
| Symbol | |
|---|
| ID | 5371879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 800001 |
|---|
| End bp | 800348 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828853 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001364879 |
|---|
| Protein GI | 152999198 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACTG ATATCATCAT GCACATTGAT TCACCTGAGA TGCTTGAGTC CATGTTAACA
GAGCACGCAG CGGTGCTGTT GTTATTTGGC GCGCCAAACT GCGGTGTGTG CCAAACGCTC
AAACCGAGAA TTGCTGAGAT GTTAGCGCAA GCGTTCCCGC AGATGCGGAT GGCCTATATT
GATTGCCAAG CCCAAGGTGA GATAGCGGCG AGCCGCAATG TATTTGCCTT GCCTGTGGTG
GAATGTGTGT TTTATGGCAA AACCTTTGGA CGTTTTTCCA AGGTGTTTTC GTTAGCGGAT
ATTCGAGGGG CGCTTGCCCG CCCCTATGGT TTAATCGTGA CGGAATAA
|
|---|
| Protein sequence | MHTDIIMHID SPEMLESMLT EHAAVLLLFG APNCGVCQTL KPRIAEMLAQ AFPQMRMAYI
DCQAQGEIAA SRNVFALPVV ECVFYGKTFG RFSKVFSLAD IRGALARPYG LIVTE
|
|---|
| |