| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0643 |
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| Symbol | |
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| ID | 5372030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 782484 |
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| End bp | 783851 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828841 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001364867 |
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| Protein GI | 152999186 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACA GACACGGGCT GCTCACCGCG CCAATTGGTC GTGTACTGCT CAACATGAGC
CTCCCCAACT TAATTGGCAT TATGACCATT CTAGGTTTCA GCCTCGCTGA CACTTTTTTT
ATCAGCCAAT TGGGCACCGA AGCCTTAGCC GCCATCAGTT TTACCTTTCC GGTGACCTTA
GTGATCTCGA GCATCGCCAT TGGTATTGGT GCTGGAGTCT CGACCAATTT AGGTCGGCTT
ATCGGCTCGG GTAATGCCCA CAAGGCCAAA GTATTCTTGC ATGATGCCTT ATTGCTGACC
TTTGGTTTGA TTGCCAGTTT AGCCGCTCTG GGTAGCATTT TTATCGAGCC ACTGTTTCGC
TTACTCGGAG CAAACGATGA CAGCTTGCCG CTAATCCACG ACTATATGAT TTACTGGTAT
GTCGGTGCAC CGCTGCTGGT GTTGTTGATG GTGGGCAATC AGGGTTTACG TTCCACTGGC
GATACCCGCT CGCCGGCGAT GATTATGGCG CTGGCGGCAG TCATTAACCT TATCCTCGAT
CCTTTATTGA TTTTTGGTAT TGGGCCGTTT CCGCGCTTAG AAATCCAAGG CGCCGCAATT
GCGACTCTGT TCGCTTGGTT AGTGGCCTTA TCTTTGTCGG GATATTTGTT GATTGTCAGG
CGCAAAATGC TCGAATGGAC AGTGTTTGAC ATCGACAGAA TGCGCGCCAA CTGGACTAAA
CTTGCCCATA TCGCCCAACC CGCTGCTTTA ATGAATTTAA TCAATCCATT AGCCAATGCC
ATTATCATGG CCATGTTGGC GCATATCGAC CACAGCGCAG TGGCGGCCTT TGGTGCAGGC
ACTCGCTTAG AGTCAGTGTT ATTAATCGTG GTGATGGCGT TATCGTCGAG CTTAATGCCC
TTTATCGCAC AGAACTTAGG TGCAGGCCAG CCACAAAGGG CGAAAGAAGC CCTGCTGCTA
TCGATAAAAT TTATCTTTAT CTTCCAAACC ATACTTTATA TTCCACTGAT CTTTTTGGCT
GAACCTATCG CGCACTTATT CAGTACCGAT CCGCTGGTGA TCGAGTGGTT GAGTTTTTAC
ATCTTAGTGC TGCCCTGCGC CTACGGCCCT TTGGGCATAG TGATTATTGT GGCGACCTCG
CTCAATGCTT ACCACAGACC TATGAGTTCA CTGGTGATCA ACCTGTGCCG CTTAGTGCTA
CTTATGCTGC CGCTGGCGGC TTTAGGATCC TATATAGGTG ACGTTAAAGG CCTGCTGCTG
GCGCTACCTG TGACCAATAT TTTGATGGGA ATTGCTTGTT ACTGGCTGGC GCAGCGGATC
TGTGAGCCGA CAAAGATCAC AACCGCTAAC GCCATTCGCG AGGGGTAA
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| Protein sequence | MKDRHGLLTA PIGRVLLNMS LPNLIGIMTI LGFSLADTFF ISQLGTEALA AISFTFPVTL
VISSIAIGIG AGVSTNLGRL IGSGNAHKAK VFLHDALLLT FGLIASLAAL GSIFIEPLFR
LLGANDDSLP LIHDYMIYWY VGAPLLVLLM VGNQGLRSTG DTRSPAMIMA LAAVINLILD
PLLIFGIGPF PRLEIQGAAI ATLFAWLVAL SLSGYLLIVR RKMLEWTVFD IDRMRANWTK
LAHIAQPAAL MNLINPLANA IIMAMLAHID HSAVAAFGAG TRLESVLLIV VMALSSSLMP
FIAQNLGAGQ PQRAKEALLL SIKFIFIFQT ILYIPLIFLA EPIAHLFSTD PLVIEWLSFY
ILVLPCAYGP LGIVIIVATS LNAYHRPMSS LVINLCRLVL LMLPLAALGS YIGDVKGLLL
ALPVTNILMG IACYWLAQRI CEPTKITTAN AIREG
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