| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0641 |
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| Symbol | |
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| ID | 5372805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 780282 |
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| End bp | 781364 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828839 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001364865 |
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| Protein GI | 152999184 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAT ATCGACTCTT GCCACTGGCA ATGCTGCTTC CAGCCCTGCT CAGTGGTTGT
TCGCCTGCGG AAAGTTCAGT ACAAGTGGAC ACTGTCCGTC CGGTTAAACT GTTTGAAGTG
CTCAATGTAG AAGCTGGAGA TTTTAGAACT TTTCCAGCCC GCGTTTCCGC TAACAGCCGC
GCCGAATTGT CGTTCCGTAT TTCTGGGCAA TTAACCGAAC TGACATTAGT CGAGGGCCAA
AGAGTCGCTC AAGGTAGCCT GCTCGCGCAG CTTGACGACA GGGATGCCAA AAATAACTTA
ATGACCCGAG AGGCCGAACA CGAACTGTTA GCCGCCGACT TTAAACGTAA GGTCGAGCTG
CTCAATCGTA AGCTGATTTC ACAATCTGAG TTTGATAGCA CTCAAGCGCA GCTCAAATCG
GCCAAGGCCG CCCTTGCGGC AGCACGCGAT CAGCTGAGTT ACACCCGCTT AACCGCGCCC
TTTAGCGGCA CTATTGCTAA ACGTTTAGTG GATAACCACC AAATAGTGCA GGCCAATCAA
GGGGTGTTAA CACTGCAAAA CAACAACTTG CTCGATGTGA GCATTCAAGT GCCCGAGGCG
ATGGCGGCGG GGCTGAAGCA ATATACCGAT CAAGCTCACT TTACCGCTAA GGTGCGTTTT
AGCGCCTTTC CCGAGCAGAG TTTCGACGCC AAGTTTAAAG AATACTCCAC CCAAGTCACC
CCAGGTACTC AAGCCTATGA AGTGGTATTT TCATTGCCTC AACCTCAAGA TATTCAATTA
CTTCCGGGGA TGAGCGCCGA GCTAACCTTG GCCTTAGTTA AAGATCCAAG CGCCCTTGCA
TCCAGCATAG TGCCCGTGAC CGCTATCGAT AAACGCGATC AAGATGGCCA AGTGCAAGTG
TGGGTTTATC AAACCCAATC GGGTGAAGTC AAACCCACTA TGGTGACGCT AGGGCGCGTG
AGTAACCAAG GTGTTGAGAT TTTAACGGGT ATCAACAAGG GCGATCTCAT CGTCAGCGCT
GGGGTGTCTC AATTATCCGC TGGCATGAAA GTCAAACCAC TACGCTGGCA GCGTGGGGTG
TAA
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| Protein sequence | MKSYRLLPLA MLLPALLSGC SPAESSVQVD TVRPVKLFEV LNVEAGDFRT FPARVSANSR
AELSFRISGQ LTELTLVEGQ RVAQGSLLAQ LDDRDAKNNL MTREAEHELL AADFKRKVEL
LNRKLISQSE FDSTQAQLKS AKAALAAARD QLSYTRLTAP FSGTIAKRLV DNHQIVQANQ
GVLTLQNNNL LDVSIQVPEA MAAGLKQYTD QAHFTAKVRF SAFPEQSFDA KFKEYSTQVT
PGTQAYEVVF SLPQPQDIQL LPGMSAELTL ALVKDPSALA SSIVPVTAID KRDQDGQVQV
WVYQTQSGEV KPTMVTLGRV SNQGVEILTG INKGDLIVSA GVSQLSAGMK VKPLRWQRGV
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