| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0630 |
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| Symbol | |
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| ID | 5369672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 763121 |
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| End bp | 766333 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828828 |
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| Product | collagenase |
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| Protein accession | YP_001364854 |
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| Protein GI | 152999173 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTTTG ATGCAAGCTT AGGTTCCACG CATCAAATAA CGCCCAAGGA AGATCTGCTT
TGCAGACTAG ATAACTACGG ATACACAATG AAAAACACAC TGCTCTTCGC AGCTATTAGC
TTAGCTTTTG CGACTCCCGT TCTCGCCCAT GACACTCATA CGAGTCACCC ATTAGGCAGC
AACACACCCA GTAATCCACA AGCGCAACCG GCACCACGAC CACCCTCGGC GCCCATTAGC
CAAATAGAAT CCCATAGACC GCTACTGCGG GAGACGCCAT TGATGGCATC CCCGAATGAG
CCAACTATGA CAGAACAGAC AATGACAGAA CCGCCTAAGA TGCATTCACG CAAGAAGCGA
GAAGTATCTG AGCAACCGCC ACTTAAGTTA CAGAGTCGCA GCGCCGCACT GCAGAGCAAT
GACTGCAGTG ACTTTGTCGG TAAATCGGGC CAAGCCCTAG TGGATCAATT GAGCCAATCG
ACACCCGAGT GCGTCGGTAA GCTCTATAGC CTCAAAGGCA GTAGCGCCAC CGCGCTATTT
AGCGAGGCCA ATGTGATCAG TGTCGCCAAC GCCATTGCCA CTAAAGCCAA GGACTACACT
GGGGTCGATG TTCAGCATCT TGAATCGCAT ATTTATTTTG TCCGCGCCGC CCTCTATGTG
CAGTTTTACA GCCCAAATGA TGTACCCGCT TACAGCAGCG CCGCTAAGGC CAGCTTAAAA
TCGGCCCTCA ACGCTTTATT TGCGAACGCT GCGATTTGGA CTGTTTCCGA TGACAATGCT
GGCGTGTTGA AAGAAGCCTT AATCCTGATT GACTCTGCCG AGCTCGGCGC CGATTTCAAT
CATGTCACCA TAAAAGTGCT AACGGACTAC GACGCTAACT GGCAAGCCAG TTTCGCCATG
AACGCCGCAG CCAACTCAGT GTTTACCACC TTATTCCGCG CCCAGTGGAA TGATGACATG
CAGGCGCTGT TCGCACGTGA CCAAGGTATT TTAGATGCGC TAAATAACTT TCAACTCGAA
CATCGTGACT TGTTAGGCAC TAATGCTGAG TATCTGTTAG TCAACTCAGT CAAAGAGTTA
TCTCGGCTGT ATTACATTGA TGCCATGCGC CCGCGAGTGA CTCAGCTAGT TAAAAACATC
CTCAGCAGCA CCAGCAAAAC CGAACCGAGC AAAGTGCTTT GGTACGCGGC GGCAGAAATG
GCCGACTATT ACGATCGCAG CCATTGTAAC GATTACAATA TCTGTGGCTT TAAGGCGCAG
CTAGAGGCCG ATACCCTACC GTTCAACTGG AAATGCTCCG ACAGCCTTAA GATCCGCGCC
CAAGATCTCT ATCAAGATCA AGCCAAGTGG GCCTGTGATG TGCTGACCAG CCAAGAGAGC
TATTTCCACA GCAAACTTGA AACGGGCATG CAACCCGTAG GGCAAGATAA CAACGATGAT
TTAGAGCTAG TGATATTTGG CAGCTCGTCT GAATACAAAT CCTTAGCGAA CAGTATCTTT
GGCATCAATA CCGACAACGG CGGCATGTAC CTTGAAGGCT CGCCCGCCGG ACTCAAAAAT
CAGGCGCGTT TTATCGCCTA TGAAGCCGAA TGGCGCACGC CGGATTTCCA TGTCTGGAAC
CTGCAACACG AATATGTGCA CTACCTCGAC GGGCGCTATA ACCTGTTTGG TGACTTTAGC
CGCGGCACTT CGGCCAATAC TATTTGGTGG ATTGAAGGCC TAGCGGAATA CATTTCTTAC
CGTGACGCCA ATACCGCGGC CATTGCCATG GGCGAAACCG GTGAATTTAT GTTGTCGACC
ATATTCAAAA ACAACTATGA ATCAGGCCAA GACCGTATCT ACCGTTGGGG TTATCTGGCG
GTGCGCTTTA TGTTTGAGCA TCACAGGGAC GATGTAAGAC AGATTCTCGC CTACCTACGT
AACGACCAAT ATGCTGAATA TCAAACCTTT ATGGATGGTA TTGGCACACG TTACGACAAC
GAGTGGCAAG GTTGGCTCGC CAGCGGCTTG AGCACGGCTG ACGATGGCAT AGTCGATAAG
GGCCCAAGTG ATGTCGATGC TGAGCCCAGT GGCCGTGAAG GCAATTGGAC TGGTCCTGCG
GGCACTATCA GTAAGGATTA CTCGCCTTGC CAAGTGACGG ACGAAGCCTA CCGTTACACT
GAATCGGCCA GCCTGAAAAT CGATGTGCCG ATGGAATGTA TTGATTCTAA ACTCGGTCGC
GCCAGTTTCA GTTTCACTAA TACCGATCGC TCGGCCCAAG ATCTTTGGAT CAAGATTGGC
GGAGGTTGGG GTGATGCCGA CATTTATTTC AATTCTAAAG GTTGGGCAAG CCCAGAACAA
AACCAAGGCG CGGGGATCGG CAACGGTAAC TATCAAGTCA TTAAAGTGCA GTTAAACCCT
GACGAATATT GGCACTACAT TACCTTGTCG GGGGATTTTG GCGGCGTCGA TATGCAAGTC
AGCACCACTG AGTTGTTCGC TGATGTTGAT CCCGATCTGG GAGATGGCGG CGTGGATCCT
GAGCCACCAG CAAATTGCGG TGCAGTAACC TTAGATTACG GCCAGCTCAC ACTGGGTAAA
AACGAGTGTA TCAGTGGTGG ACGCAACAGC TTCTACTTCT GGGTTGAGGA AGATAATACT
CAGTTCACCG TCACCACTAA GGGCGGCTCT GGGGATGCCA ATCTTTACTT CAATGCCAGT
CAGTGGGCCG ACGCCGATAA TGCCGATGCC AAGAGCACTC AAGTGGGTAA TCAAGAGTCG
CTAAGTTTTA GTGCCAATCG CGGCTGGCGT TATATCACAG TGGACACTGC CACTGAGTTT
AGCGGCGTCA CTCTCACCCT CAATACAGGC GCGAGCAACA CACCTACGCC AGCTCTAATC
GCTAATGCCT GCACGACGCA ATCACCCTTG AGTCATGGTG AGCTGAGTTC AGGCAAAGCC
ATCTGCACCA CCGATGGTCG CAGCGATTAC TATCTTTGGG TGCCAGAAGG TACGAGTCAG
TTAAGCATCA ACTCGGCCCA CGGCAGTGGT GATGTGAGCC TGTTTTCGGG GACAACTTGG
GCCAATGCTC AACACTTCGA TGCAGCGTCT GTCACGCCCG CTAACACTCA AGAAAGTATC
ACAGTCGATG CGCCAAATGT GGGGTGGTAT TACATCACAG TGCAGAGTGA ACCTCAGAGT
TCGGGTGTCG CACTGCAAGT CGATTTACGC TAG
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| Protein sequence | MRFDASLGST HQITPKEDLL CRLDNYGYTM KNTLLFAAIS LAFATPVLAH DTHTSHPLGS
NTPSNPQAQP APRPPSAPIS QIESHRPLLR ETPLMASPNE PTMTEQTMTE PPKMHSRKKR
EVSEQPPLKL QSRSAALQSN DCSDFVGKSG QALVDQLSQS TPECVGKLYS LKGSSATALF
SEANVISVAN AIATKAKDYT GVDVQHLESH IYFVRAALYV QFYSPNDVPA YSSAAKASLK
SALNALFANA AIWTVSDDNA GVLKEALILI DSAELGADFN HVTIKVLTDY DANWQASFAM
NAAANSVFTT LFRAQWNDDM QALFARDQGI LDALNNFQLE HRDLLGTNAE YLLVNSVKEL
SRLYYIDAMR PRVTQLVKNI LSSTSKTEPS KVLWYAAAEM ADYYDRSHCN DYNICGFKAQ
LEADTLPFNW KCSDSLKIRA QDLYQDQAKW ACDVLTSQES YFHSKLETGM QPVGQDNNDD
LELVIFGSSS EYKSLANSIF GINTDNGGMY LEGSPAGLKN QARFIAYEAE WRTPDFHVWN
LQHEYVHYLD GRYNLFGDFS RGTSANTIWW IEGLAEYISY RDANTAAIAM GETGEFMLST
IFKNNYESGQ DRIYRWGYLA VRFMFEHHRD DVRQILAYLR NDQYAEYQTF MDGIGTRYDN
EWQGWLASGL STADDGIVDK GPSDVDAEPS GREGNWTGPA GTISKDYSPC QVTDEAYRYT
ESASLKIDVP MECIDSKLGR ASFSFTNTDR SAQDLWIKIG GGWGDADIYF NSKGWASPEQ
NQGAGIGNGN YQVIKVQLNP DEYWHYITLS GDFGGVDMQV STTELFADVD PDLGDGGVDP
EPPANCGAVT LDYGQLTLGK NECISGGRNS FYFWVEEDNT QFTVTTKGGS GDANLYFNAS
QWADADNADA KSTQVGNQES LSFSANRGWR YITVDTATEF SGVTLTLNTG ASNTPTPALI
ANACTTQSPL SHGELSSGKA ICTTDGRSDY YLWVPEGTSQ LSINSAHGSG DVSLFSGTTW
ANAQHFDAAS VTPANTQESI TVDAPNVGWY YITVQSEPQS SGVALQVDLR
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