Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0627 |
Symbol | |
ID | 5369331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 756609 |
End bp | 757826 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828825 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001364851 |
Protein GI | 152999170 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACAC AAACGCTGTT TATACAAAGA GTGACTGAAC GAGCACGCAG TGCATGCGAT ATTTCATTAA AAAGCCCCCA TCATCTCCCA AAGGCGCCCT TATTCGCGCC TTTGACGTTT CTACTGGCGA GTCTTTTCAC CTTAACCCCT ATGGCTGTAT TAGCGGCGGA CAAGGTCGAC GTTATCCCTG TGACGGTCGA GGCCATTAAA GAAACCTCCT TTGCCGATGT CGTCAACGAA GTCGGTAAAA TTAACGCCAT CGATTCGGCG ATACTCAACT TTAACGCCAG CGAAAAAATT AGCGCCATTC ATTTTAGTAA CGGCGACAAA GTGACGAAAG GCCAAGTGAT TGCCGAGCAA GATAACACTA AGGCCAAGGC CGATTTAGAC AAGGCTAAGA GCACCTTAGC ACTGGCGAAA ACTAAGCTTG AGCGTATTGA AGACCTGCTG ATCAAAGAGC CATTCGCACT CGCCAAGCAA GATGTAGATG AGCTGCGGGA AAATGTGAAT CTGGCCGATG CCGATTTTCG CCAGAAACAA GCAACCATGA ACGATTACTT GATCAAGGCG CCCTTCGACG GTCAGCTAAC AAGCTTTAGC CAGTCCATCG GCAGCCAAAT TGGCGCAGGT ACAGCCTTAG TCACTCTCTA TAGTTTAAAT CCCGTCGAAG TCCGTTATGC CATCAGCCAA AATGATTTTG GCAAGGCGCA AAAAGGTCAG AAGGTAAATG TAACGGTCGA AGCTTATGGC AATAAGGTGT TCAAAGGGTT AGTTAACTAT GTGGCTCCAG CGGTGGATGA AAGCTCAGGA CGAGTTGAAG TGCACGCCGC CCTCGACAAC CCAGAGTTCA AACTGGCGCC CGGCATGTTC GCCAATATTA AGCAGTTCTA TAGCCGTGGG ATAAAACGCT TATTAGTGCC GCAAAATTCG ATTATCGCCA ATAACGACGA ACGCTTTGTC TGGTTAGTGC GGGGCGATAG CGCTGTAAAA CAAGTGGTTA AACTCGCGCA AAACACCAAC GACGGTTATG CGGTCGTGAC CGAAGGTTTA GCCGAAGGCG ATCTCGTGGT TAAGACGGGC ATGCAAAACC TCAAGTCCGA TAGCAAGATC AAAGTCATTC AGGATAAAAA CACGGCCGAT AAAGCGGCAG CCTCCAGTTC CAACTCAGGT GCGGGTGCTA CTCCAAGTCC TGAACCTAGC ACTGAGGGGG CCGAATAA
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Protein sequence | MFTQTLFIQR VTERARSACD ISLKSPHHLP KAPLFAPLTF LLASLFTLTP MAVLAADKVD VIPVTVEAIK ETSFADVVNE VGKINAIDSA ILNFNASEKI SAIHFSNGDK VTKGQVIAEQ DNTKAKADLD KAKSTLALAK TKLERIEDLL IKEPFALAKQ DVDELRENVN LADADFRQKQ ATMNDYLIKA PFDGQLTSFS QSIGSQIGAG TALVTLYSLN PVEVRYAISQ NDFGKAQKGQ KVNVTVEAYG NKVFKGLVNY VAPAVDESSG RVEVHAALDN PEFKLAPGMF ANIKQFYSRG IKRLLVPQNS IIANNDERFV WLVRGDSAVK QVVKLAQNTN DGYAVVTEGL AEGDLVVKTG MQNLKSDSKI KVIQDKNTAD KAAASSSNSG AGATPSPEPS TEGAE
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