| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0627 |
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| Symbol | |
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| ID | 5369331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 756609 |
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| End bp | 757826 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828825 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001364851 |
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| Protein GI | 152999170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAC AAACGCTGTT TATACAAAGA GTGACTGAAC GAGCACGCAG TGCATGCGAT
ATTTCATTAA AAAGCCCCCA TCATCTCCCA AAGGCGCCCT TATTCGCGCC TTTGACGTTT
CTACTGGCGA GTCTTTTCAC CTTAACCCCT ATGGCTGTAT TAGCGGCGGA CAAGGTCGAC
GTTATCCCTG TGACGGTCGA GGCCATTAAA GAAACCTCCT TTGCCGATGT CGTCAACGAA
GTCGGTAAAA TTAACGCCAT CGATTCGGCG ATACTCAACT TTAACGCCAG CGAAAAAATT
AGCGCCATTC ATTTTAGTAA CGGCGACAAA GTGACGAAAG GCCAAGTGAT TGCCGAGCAA
GATAACACTA AGGCCAAGGC CGATTTAGAC AAGGCTAAGA GCACCTTAGC ACTGGCGAAA
ACTAAGCTTG AGCGTATTGA AGACCTGCTG ATCAAAGAGC CATTCGCACT CGCCAAGCAA
GATGTAGATG AGCTGCGGGA AAATGTGAAT CTGGCCGATG CCGATTTTCG CCAGAAACAA
GCAACCATGA ACGATTACTT GATCAAGGCG CCCTTCGACG GTCAGCTAAC AAGCTTTAGC
CAGTCCATCG GCAGCCAAAT TGGCGCAGGT ACAGCCTTAG TCACTCTCTA TAGTTTAAAT
CCCGTCGAAG TCCGTTATGC CATCAGCCAA AATGATTTTG GCAAGGCGCA AAAAGGTCAG
AAGGTAAATG TAACGGTCGA AGCTTATGGC AATAAGGTGT TCAAAGGGTT AGTTAACTAT
GTGGCTCCAG CGGTGGATGA AAGCTCAGGA CGAGTTGAAG TGCACGCCGC CCTCGACAAC
CCAGAGTTCA AACTGGCGCC CGGCATGTTC GCCAATATTA AGCAGTTCTA TAGCCGTGGG
ATAAAACGCT TATTAGTGCC GCAAAATTCG ATTATCGCCA ATAACGACGA ACGCTTTGTC
TGGTTAGTGC GGGGCGATAG CGCTGTAAAA CAAGTGGTTA AACTCGCGCA AAACACCAAC
GACGGTTATG CGGTCGTGAC CGAAGGTTTA GCCGAAGGCG ATCTCGTGGT TAAGACGGGC
ATGCAAAACC TCAAGTCCGA TAGCAAGATC AAAGTCATTC AGGATAAAAA CACGGCCGAT
AAAGCGGCAG CCTCCAGTTC CAACTCAGGT GCGGGTGCTA CTCCAAGTCC TGAACCTAGC
ACTGAGGGGG CCGAATAA
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| Protein sequence | MFTQTLFIQR VTERARSACD ISLKSPHHLP KAPLFAPLTF LLASLFTLTP MAVLAADKVD
VIPVTVEAIK ETSFADVVNE VGKINAIDSA ILNFNASEKI SAIHFSNGDK VTKGQVIAEQ
DNTKAKADLD KAKSTLALAK TKLERIEDLL IKEPFALAKQ DVDELRENVN LADADFRQKQ
ATMNDYLIKA PFDGQLTSFS QSIGSQIGAG TALVTLYSLN PVEVRYAISQ NDFGKAQKGQ
KVNVTVEAYG NKVFKGLVNY VAPAVDESSG RVEVHAALDN PEFKLAPGMF ANIKQFYSRG
IKRLLVPQNS IIANNDERFV WLVRGDSAVK QVVKLAQNTN DGYAVVTEGL AEGDLVVKTG
MQNLKSDSKI KVIQDKNTAD KAAASSSNSG AGATPSPEPS TEGAE
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