Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0625 |
Symbol | |
ID | 5369629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 753286 |
End bp | 754737 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828823 |
Product | MltD domain-containing protein |
Protein accession | YP_001364849 |
Protein GI | 152999168 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGAAAC ATTTTCGCCA AACGCACTCT TTTACAGTGC TAATGCTGGC CATGTTCGTG GCCCAATTGA GCGGTTGCGC GACCACGTCG GCAAGCCCAT CGACCACAGA ATTCAGTGCC CCAGCAAATG ATGTGAGTAA CGGTAGCGAC CACTCGCCAC AACACCAGCA GCACACGCCA CCCGCTGTGG TTGAGCAGTA CAGCGACGTT TGGGAAAAGA TCCAACACGC CAATACCATT GACGTACATG ACGATGCCGA AGTGCGCAAA CAGCGTAACT TTTTCGATGA TAAACAGAAA TTTATGAACC AAGTCGGCGA ACGCGCCGAG CCCTTTTTGT ATTACATCGT CAGCCAGCTC GAAGCCCGTA ACATGCCATT AGAATTGGCG TTATTACCCA TAGTCGAGAG TGGTTACAAT CCACTGGCGC AGGCAAATGG CCCGGCTGGA CTGTGGCAGA TGATCCCCGC CACGGGGCGT AATTTTGGCT TAACGGTTAA CTCTGCCTAC GACGGTCGCA AAGATGCGCT GGCCTCAACC GATGCCGTGC TCGACTATCT ACAGCATTTA TACGACACCT TAGATCACGA CTGGATCAAC GCCGTCGCAG CATACAATAC CGGTGAATTG GTGATTAAAG CCGCCATCGA CAAGAACAAA GCCAAGGGTA AACCGACGGA CTTTTGGTCG CTGGGCATTC CGGCGAAACG CGTACAAACT GTGCCTAAGT GGCTGGCGTT TATTCAAATT ATTCGCGCCC CTAATCATTA CAATCTAAAA GTACGGCCGA TAGCTAACCG CCCTTACTTG GATAGAGTAC CTGCACCCAA TGGCGTGGAT ATCGGCCAAA TCGCCAATGC GGCTGGGCTG AGCAAGGCAG AATTTAAAAC CTATAACCCT GGCTTTCGCC AAGGCGTGAT CCCGATCAAA GGCAAATATC AAATCGCCTT ACCGCTGGAA AACATAGGTC AATATCAAGA AAATCACGAC AAACTCTACG CCCAAAAACG CTATGACAGC CAAAGCTACA TCGTTAAATC CGGCGACAGC CTAGGCACAA TCGCGGCTAA GTTTGATACG TCAGTCAAAG CATTAAAACA GGCTAATAAT CTGACCTCTG ACCGTCTCAA AGTCGGCCAA GAGCTCACAC TATTAACGCC AATGGCAGCC AATGATAATG CGCCTGAACC CGCTAAAACC AACACTAAGG CCGATAGCAA AGTCAGCAGC AAGTTATCGA CTAAAGCAAA TGCCAGTGGC ACTAAAGCCG CCAGCTCAAA ATCGGCCGAA AAACCAGCGG CAAAAGCCAA AACCTACAAG GTGAAATCCG GCGATTCACT GGATAAAATC GCCCGTAAGA ATAAGGTCAA ACTGGCTGAT TTAATGAAGT GGAACCAGCT CAATGGCAAG AGCATTATTA AGCCAGGTCA AGAACTGAAA ATCAGCGAAT AA
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Protein sequence | MRKHFRQTHS FTVLMLAMFV AQLSGCATTS ASPSTTEFSA PANDVSNGSD HSPQHQQHTP PAVVEQYSDV WEKIQHANTI DVHDDAEVRK QRNFFDDKQK FMNQVGERAE PFLYYIVSQL EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTVNSAY DGRKDALAST DAVLDYLQHL YDTLDHDWIN AVAAYNTGEL VIKAAIDKNK AKGKPTDFWS LGIPAKRVQT VPKWLAFIQI IRAPNHYNLK VRPIANRPYL DRVPAPNGVD IGQIANAAGL SKAEFKTYNP GFRQGVIPIK GKYQIALPLE NIGQYQENHD KLYAQKRYDS QSYIVKSGDS LGTIAAKFDT SVKALKQANN LTSDRLKVGQ ELTLLTPMAA NDNAPEPAKT NTKADSKVSS KLSTKANASG TKAASSKSAE KPAAKAKTYK VKSGDSLDKI ARKNKVKLAD LMKWNQLNGK SIIKPGQELK ISE
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