Gene Shew185_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0625 
Symbol 
ID5369629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp753286 
End bp754737 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content49% 
IMG OID640828823 
ProductMltD domain-containing protein 
Protein accessionYP_001364849 
Protein GI152999168 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAC ATTTTCGCCA AACGCACTCT TTTACAGTGC TAATGCTGGC CATGTTCGTG 
GCCCAATTGA GCGGTTGCGC GACCACGTCG GCAAGCCCAT CGACCACAGA ATTCAGTGCC
CCAGCAAATG ATGTGAGTAA CGGTAGCGAC CACTCGCCAC AACACCAGCA GCACACGCCA
CCCGCTGTGG TTGAGCAGTA CAGCGACGTT TGGGAAAAGA TCCAACACGC CAATACCATT
GACGTACATG ACGATGCCGA AGTGCGCAAA CAGCGTAACT TTTTCGATGA TAAACAGAAA
TTTATGAACC AAGTCGGCGA ACGCGCCGAG CCCTTTTTGT ATTACATCGT CAGCCAGCTC
GAAGCCCGTA ACATGCCATT AGAATTGGCG TTATTACCCA TAGTCGAGAG TGGTTACAAT
CCACTGGCGC AGGCAAATGG CCCGGCTGGA CTGTGGCAGA TGATCCCCGC CACGGGGCGT
AATTTTGGCT TAACGGTTAA CTCTGCCTAC GACGGTCGCA AAGATGCGCT GGCCTCAACC
GATGCCGTGC TCGACTATCT ACAGCATTTA TACGACACCT TAGATCACGA CTGGATCAAC
GCCGTCGCAG CATACAATAC CGGTGAATTG GTGATTAAAG CCGCCATCGA CAAGAACAAA
GCCAAGGGTA AACCGACGGA CTTTTGGTCG CTGGGCATTC CGGCGAAACG CGTACAAACT
GTGCCTAAGT GGCTGGCGTT TATTCAAATT ATTCGCGCCC CTAATCATTA CAATCTAAAA
GTACGGCCGA TAGCTAACCG CCCTTACTTG GATAGAGTAC CTGCACCCAA TGGCGTGGAT
ATCGGCCAAA TCGCCAATGC GGCTGGGCTG AGCAAGGCAG AATTTAAAAC CTATAACCCT
GGCTTTCGCC AAGGCGTGAT CCCGATCAAA GGCAAATATC AAATCGCCTT ACCGCTGGAA
AACATAGGTC AATATCAAGA AAATCACGAC AAACTCTACG CCCAAAAACG CTATGACAGC
CAAAGCTACA TCGTTAAATC CGGCGACAGC CTAGGCACAA TCGCGGCTAA GTTTGATACG
TCAGTCAAAG CATTAAAACA GGCTAATAAT CTGACCTCTG ACCGTCTCAA AGTCGGCCAA
GAGCTCACAC TATTAACGCC AATGGCAGCC AATGATAATG CGCCTGAACC CGCTAAAACC
AACACTAAGG CCGATAGCAA AGTCAGCAGC AAGTTATCGA CTAAAGCAAA TGCCAGTGGC
ACTAAAGCCG CCAGCTCAAA ATCGGCCGAA AAACCAGCGG CAAAAGCCAA AACCTACAAG
GTGAAATCCG GCGATTCACT GGATAAAATC GCCCGTAAGA ATAAGGTCAA ACTGGCTGAT
TTAATGAAGT GGAACCAGCT CAATGGCAAG AGCATTATTA AGCCAGGTCA AGAACTGAAA
ATCAGCGAAT AA
 
Protein sequence
MRKHFRQTHS FTVLMLAMFV AQLSGCATTS ASPSTTEFSA PANDVSNGSD HSPQHQQHTP 
PAVVEQYSDV WEKIQHANTI DVHDDAEVRK QRNFFDDKQK FMNQVGERAE PFLYYIVSQL
EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTVNSAY DGRKDALAST
DAVLDYLQHL YDTLDHDWIN AVAAYNTGEL VIKAAIDKNK AKGKPTDFWS LGIPAKRVQT
VPKWLAFIQI IRAPNHYNLK VRPIANRPYL DRVPAPNGVD IGQIANAAGL SKAEFKTYNP
GFRQGVIPIK GKYQIALPLE NIGQYQENHD KLYAQKRYDS QSYIVKSGDS LGTIAAKFDT
SVKALKQANN LTSDRLKVGQ ELTLLTPMAA NDNAPEPAKT NTKADSKVSS KLSTKANASG
TKAASSKSAE KPAAKAKTYK VKSGDSLDKI ARKNKVKLAD LMKWNQLNGK SIIKPGQELK
ISE