| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0619 |
|---|
| Symbol | |
|---|
| ID | 5369723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 741671 |
|---|
| End bp | 742729 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640828817 |
|---|
| Product | L-asparaginase, type II |
|---|
| Protein accession | YP_001364843 |
|---|
| Protein GI | 152999162 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT CAATGCGTAA GCTCTTGCTC TCGGTCACCT TAGGGTTAGT TCTCTCCTCT
GCGGCGCAGG CGCTTCCACA GGTACGGATC ATTGCCACGG GTGGCACCAT TGCCGGAGTA
GGGCAATCGG CCACTGAGTC TAACTATCAG GCTGGCGAAG TGGGCATTAG TAGCTTAATT
GCGGCCGTGC CTGAAATGAA ACAGCTTGCC GATATTCAAG GTGAGCAACT GGTTAAAATC
GGTTCGCAGG ACATGAACGA TAAAGTTTGG CTAGCGTTAG CCAAGCGCAT CAATCTGTTA
CTGGCCGATA AAGAGGTCGA CGGTATCGTC ATCACCCACG GCACCGACAC CTTAGAAGAA
ACCGCTTATT TTCTAAACCT CACCATCAAG AGCGATAAAC CTGTGGTATT GGTTGGCGCT
ATGCGTCCAT CAACCGCCAT GAGCGCCGAT GGTCCAATGA ATTTGTATAA CGCCGTCGCG
ACCGCCGCTA ACCTTGAATC TAAAGGTCGA GGCGTATTAG TGGTAATGAA CGATACCGTA
TTGAACGCCC GCGACGTCAC TAAGACGAAT ACCACAGGTG TGCATACCTT TGTCGCGCCT
AACTTTGGCC CGCTTGGCGT GATCCATAAC AGCAAGATTG AGTACATGGG TAATACGGAG
CGTCAACATA CTACGCAAAC ACCATTTGAT GTCAGCAAAC TCGACAAGTT ACCGCAGGTA
GGCATAGTGT ATAACTACGC CAATGCCAGT GATGTACCAG CCAAAGCCAT GGTTGAAGCG
GGTTTTGATG GCATAGTCAG TGCCGGTGTG GGTAACGGTA ATATCTACCA CTCTATATTC
GATGTTTTAG CTAAAGCGAG TCAAAAAGGC ACCTTAGTCG TTCGCTCTAG CCGAGTGCCC
ACAGGTGCAA CGACGCTCGA TGCTGAGATA GATGATGCTA AATACGGTTT TATTGCAGCA
GGTAATCTTA ACCCGCAAAA AGCCCGTATT TTGTTGATGC TATCTTTAAC GAAAAGCAAA
GATCCACAGC AGATCCAACG TTGGTTTCAA CAGTTTTAG
|
|---|
| Protein sequence | MNFSMRKLLL SVTLGLVLSS AAQALPQVRI IATGGTIAGV GQSATESNYQ AGEVGISSLI
AAVPEMKQLA DIQGEQLVKI GSQDMNDKVW LALAKRINLL LADKEVDGIV ITHGTDTLEE
TAYFLNLTIK SDKPVVLVGA MRPSTAMSAD GPMNLYNAVA TAANLESKGR GVLVVMNDTV
LNARDVTKTN TTGVHTFVAP NFGPLGVIHN SKIEYMGNTE RQHTTQTPFD VSKLDKLPQV
GIVYNYANAS DVPAKAMVEA GFDGIVSAGV GNGNIYHSIF DVLAKASQKG TLVVRSSRVP
TGATTLDAEI DDAKYGFIAA GNLNPQKARI LLMLSLTKSK DPQQIQRWFQ QF
|
|---|
| |