| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0607 |
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| Symbol | |
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| ID | 5369862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 725386 |
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| End bp | 726606 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640828805 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001364831 |
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| Protein GI | 152999150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ACATTAAAAA CACCTTGCTG CTTCTTATCC TTGGCGCAAC GGTTGCTGTT
GTAGGATACA AGTACACTCA AGTACAACAG GATCAACCTA TCTTTACCAC CGATGTGGTC
CAACGCGGCA ATATTGAAAA AGTGGTACTC ACAAACGGCG TGCTTTATCC GTCTAAATTA
GTCAGTGTCG GCGCTCAAGT GTCGGGGTTA ATCGAAACAA TGGACGTGAA TGTTGGCCAA
AACATAAAAC AGGGCGACTT GATTGCTCAA ATCGATAACT TAACTCAACA AAATGCCCTT
AAAGAAGCCC AAGCATCATT GCAAAGTATT GATGCGCAAT ATCGGGCAAA GCAGGCTCAA
ATAAAAGTCG CACAGTCTGA ATATGCTCGT AATAAAAAGA TGCTAGTTAA TGGCGCTGCG
TCGGTATCAG ACTTTGACTC GGCAGAATCG ATATTGGCGG TTTATCTGGC TGAGCTAGAT
GAACTCAGTG CTGAAAAAGA CAAAGCAATC ATCAGTGTCG ATAGCGCCAA GCTCAATTTA
GGTTACACAA CTATTCGTTC CCCCATTGAT GGCACAGTGA TTTACGTGTC GGTAGAAGAA
GGGCAAACCG TTAATAACAA TCAAGGTACC CCCAGTATTA TTGAGCTAGC GCAATTGGAT
TTAATGACGA TTAAGGCGCA GGTTTCTGAA GCTGACATTA TCAATGTGAG TGCAGGGCAA
GCTGTTTATT TCAGTATTTT GGGGGCGACA GCGAAAAAGT ACCGGGGTGT ATTACGCACC
ATTGAACCAG GGCCAACATT GCTTAGCGGG GACGACAGTT CGTTGTTGAT TGGCGATGAT
GAGGCGATTT ATTACAACGC TCTGTTTGAT GTTGAAAACC CAGGCAATCA GTTGCGTTTT
GGCATGACGG CACAGGTATC GATTATTTTA GCCAGTGCGC AAGATACGTT GCTTGTCCCA
TCACAGATAT TGATAACAAA AACGGGGCCA AGTGTTTCGT ATCAAGTGCC AGTGATAGTA
GACAACCACA TTGAATATCG CGATGTTGAA GTGGGCATTA ACAATAAAGT CTACGCTCAA
ATCCTCTCAG GGCTTAACGA AGGTGATCAA ATCATGCTTG GTCAAACTTC AGCTAATGAC
GATGCGATTT CTATGACCGG CTTATCTAAG GGCAATATGC TCGGACAAAG TGTACCAGGT
CTTGGTAAAG GAACGAGGTA A
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| Protein sequence | MKKNIKNTLL LLILGATVAV VGYKYTQVQQ DQPIFTTDVV QRGNIEKVVL TNGVLYPSKL
VSVGAQVSGL IETMDVNVGQ NIKQGDLIAQ IDNLTQQNAL KEAQASLQSI DAQYRAKQAQ
IKVAQSEYAR NKKMLVNGAA SVSDFDSAES ILAVYLAELD ELSAEKDKAI ISVDSAKLNL
GYTTIRSPID GTVIYVSVEE GQTVNNNQGT PSIIELAQLD LMTIKAQVSE ADIINVSAGQ
AVYFSILGAT AKKYRGVLRT IEPGPTLLSG DDSSLLIGDD EAIYYNALFD VENPGNQLRF
GMTAQVSIIL ASAQDTLLVP SQILITKTGP SVSYQVPVIV DNHIEYRDVE VGINNKVYAQ
ILSGLNEGDQ IMLGQTSAND DAISMTGLSK GNMLGQSVPG LGKGTR
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