Gene Shew185_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0571 
Symbol 
ID5369701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp662549 
End bp663406 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content32% 
IMG OID640828773 
Producthypothetical protein 
Protein accessionYP_001364799 
Protein GI152999118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAA TTACTATTGT TCAGGGAGTC CCTGCTAGAG GTCTTTTAAA AGCAAGGAAT 
AAAATATTAG GGATAACTGA AACCATTGTT ACAGTAGATG ATGATTTTAG TATTGGAAGC
TTAGATGGCT TAGACAACCT AAGAACCTTA AATGACAAGC ATGACATCAA GTATAACCTA
AGACTTAATC TTTGGCAGGA GATTTGGAAA AGTCAATTTT GGTATGTCAC TACTGAATAC
GATAAATACT TATTAGATCA ACAAATAAAA TCTCATTGCA ACTTACTTTT ATCAATATCA
ACAGCAAATA CTATAACAGT ATGGGTTTCT CGTAACGTAC ATGATGAATT AATGCTAAAA
ATGATAGCAT ATAACATGTC GAAAAAAGCA AATTTATTCG TCGTAAATGT CAATGAAATA
GACACAGAAA ACCGACACTC AGTTGCACAC TTTTCTCCAG AGGAAATTAT TGACGCCGAA
ATTCGTGGTT ATTTAAAACC ACAACAAATA GATAAAATGG GAGTCGATCT GTTAAAATCA
CAATGGAAAA TCTGGAGATT AAAAGGGAAA GGGTTTAGAG ATTTTAACGA TAAAGGATAT
ATTACTGAAT ATACAGTTAA CCATTTAGAT TGTTTATTTT TAACAACTAT AATAAAATTA
AAGAATGAAT CAACTAATAC AATTATATGT GAAATACTTA AATACAGCCC AACATTAAAT
CCGCTTTTTA TTTACTGGCG ATTGAGTATT TTAAGTAACC TGAAACTGAT AACACTAACA
AGTACGTCAC AAGCAGGAGA CGAAAATTAC CCATCGCCAC CTAAAATATC GTTACCCAGG
CGACCTATTC ATCGCTAG
 
Protein sequence
MKKITIVQGV PARGLLKARN KILGITETIV TVDDDFSIGS LDGLDNLRTL NDKHDIKYNL 
RLNLWQEIWK SQFWYVTTEY DKYLLDQQIK SHCNLLLSIS TANTITVWVS RNVHDELMLK
MIAYNMSKKA NLFVVNVNEI DTENRHSVAH FSPEEIIDAE IRGYLKPQQI DKMGVDLLKS
QWKIWRLKGK GFRDFNDKGY ITEYTVNHLD CLFLTTIIKL KNESTNTIIC EILKYSPTLN
PLFIYWRLSI LSNLKLITLT STSQAGDENY PSPPKISLPR RPIHR