Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0552 |
Symbol | |
ID | 5369974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 633163 |
End bp | 635085 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828757 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001364783 |
Protein GI | 152999102 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCCG ATGAAAGAAC TTTCCGTGAA CTCGGCCTAT CCGAGAATTT GTTGCGTGCT CTTGACGAGC TAGGTTATGA AAAACCGACG CCAATCCAAT CAGCCAGTAT TGATCCACTT ATGGCTGGCA AAGATATTTT AGGTCAAGCG CAAACAGGTA CAGGTAAAAC TGGCGCCTTC GCTTTACCAC TATTAAACAA AGTTACCAGC CAAACTACAC CGCAAATTTT AGTCTTAGCA CCAACACGTG AATTAGCCGT GCAGGTTGCT GAAGCGTTCA GTAGCTATGC CAAATTTATG AAGAATTTCC ACGTTCTTCC TATCTATGGC GGCCAAAGCA TGCAACAACA GTTGAATGCC CTGAAACGTG GCCCACAAGT TATCGTTGGT ACGCCAGGTC GTGTTATGGA CCATATGCGT CGCGGCACCT TGAAACTCGA CTCATTACAA GCTTTAGTGC TTGATGAAGC CGATGAAATG TTAAAAATGG GCTTCATCGA TGATATCGAA TGGATCCTTG AGCACACGCC AAGCGAGCGC CAACTGGCGT TATTCTCTGC CACTATGCCA GAGCAAATTA AGCGTGTTGC TAACCAGCAC TTACGTAATC CTGTACATGT TCGTATCGAA TCAAGCCAAA CTACGGTTGA GTCAATCGAA CAGCGTTTCG TACAAGTATC ACAACACAAC AAACTTGAAG CTTTAGTACG TGTATTAGAA GTTGAAAACA CTGAAGGTGT GATCATATTC GTGCGTACTC GTAACTCATG TGTTGAGTTA GCTGAGAAGT TAGAAGCCCG CGGTTATGCT TCATCACCAC TACACGGTGA CATGAACCAG CAAGCCCGTG AGCGTGCAGT TGACCAACTG AAACGTGGCA AGTTAGACAT TCTGATCGCG ACTGACGTTG CGGCCCGTGG TCTTGACGTT GAGCGTATCG GTCACGTTGT AAACTACGAT ATTCCGTATG ATGCTGAAGC TTATGTACAC CGTATTGGCC GTACAGGCCG TGCTGGCCGT ACTGGTATGG CGATCCTGTT TGTAACTAGC CGTGAAATGC GCATGCTGCG CACCATCGAG CGTTCAACGA ACAGCCGCAT TTCACCAATG AAAATCCCAA GCCCAGAGAC TGTTGCAGAA CGTCGTCTGT CTCGCTTAGG TGAGCAATTG GCTGAAACAA TCAACGGCGA TTTAGATTTT ATGAAAGAAG CTGTTGCTCA ATTATGCCAA CAGTTAGAAG TCGATACTGA TCTGCTAGCC GCTGCATTAT TACAGCAAGT TCAGCAAGAA CGTCCTTTGC AATTGCCAGC AATTCAAGAA CGTGTTCGTG ATGAACGCAG TGAGCGCACT GAACGTAGCG ACCGCGGAAG TGATCGTAAT GACCGTGGTG GTGAGCGTGG TGAACGCAGA AGTCGCGAAC CGCGTCCAAT GCCAGCAAGC TTAGGCTCAG CTGAAGCGTT GAAAGACAAT CCAGATTTGA AAATGTGCCG TTACGTGATC GACGTAGGTC GTGAGAATGG TGTAGGTGTG GGTAACATCG TTGGCGCTAT CGCGAACGAA GCTAACATCG ACAGCCGTTA CATTGGCGCA ATCCAACTTT ACGATGCAGT GACCACTGTT GACCTGCCAG ACGGCATGCC AAAAGACGTG TTACAGCACC TACGTAAAGT ACGTGTTTGT GGCAAGCCAT TGAACATCCG CGAAGCTGGC GATCAAGTAT TTGTTGATTC AGGCCGTAGT GCTCGTTCAG ACCGCCCTGC TGGTGACCGT AAACCACGCG GCGATCGTCC AACGGGTGAC CGCCCAGCTG GTGACCGTAA GCCACGCGCT GCGTCTACTG GTGACAAGCC ATTTGCTGAC CGCAAACCAC GTGCAGACAA ACCTGCCGGT GAGCGTAAGC CACGTAAACC ACGTGAAGAC TAA
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Protein sequence | MSSDERTFRE LGLSENLLRA LDELGYEKPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF ALPLLNKVTS QTTPQILVLA PTRELAVQVA EAFSSYAKFM KNFHVLPIYG GQSMQQQLNA LKRGPQVIVG TPGRVMDHMR RGTLKLDSLQ ALVLDEADEM LKMGFIDDIE WILEHTPSER QLALFSATMP EQIKRVANQH LRNPVHVRIE SSQTTVESIE QRFVQVSQHN KLEALVRVLE VENTEGVIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVDQL KRGKLDILIA TDVAARGLDV ERIGHVVNYD IPYDAEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE RSTNSRISPM KIPSPETVAE RRLSRLGEQL AETINGDLDF MKEAVAQLCQ QLEVDTDLLA AALLQQVQQE RPLQLPAIQE RVRDERSERT ERSDRGSDRN DRGGERGERR SREPRPMPAS LGSAEALKDN PDLKMCRYVI DVGRENGVGV GNIVGAIANE ANIDSRYIGA IQLYDAVTTV DLPDGMPKDV LQHLRKVRVC GKPLNIREAG DQVFVDSGRS ARSDRPAGDR KPRGDRPTGD RPAGDRKPRA ASTGDKPFAD RKPRADKPAG ERKPRKPRED
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