| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0544 |
|---|
| Symbol | |
|---|
| ID | 5369634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 624694 |
|---|
| End bp | 625761 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828749 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001364775 |
|---|
| Protein GI | 152999094 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3258] Cytochrome c |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATT CCGCAATGTT ATTACTGGCC GCGATGGGGT CGTTAACCGT GCAGGCGCAA
GCCGAATCGG ATCCACTGCA AGAGCGCCCA GATAAACAAG CCCCGCTGCC TTCTTTCCCT
AAGATACCGG ATCAAACCTA TCTCGTCCCT AGACCTTTGA GTGCCATTCC TGAAGGCGCC
TTTGGTGACA AAGTGCGTTT GGGTTATCAG CTATTTGTGA ATACCCAACA GCTGCGTGAT
AAGTATGTGG GCAACGAACT TAACTGCACC AACTGCCATA TGGATGCGGG CCGTAAAGCC
AATGCTTCAC CCCTATGGGG CGCGTATTTT GCTTATCCGG CCTATCGCAA AAAAGATAAT
AAGGTCAGTA GCTTTGAAGA ACGCATCCAA GGCTGCTTTA ACTATTCGAT GAATGGTAAA
GCCCCTGCAT CGGGTAGCCC TGAGTTAGTG GCGCTTTCTG CCTATGCCTA TTGGTTAGGC
ATGGGTGGCT TGATGGACGA AGCAAATATT AGCGGCCCAG TCCCTGAGCT TAGCGATGCC
GAGTTAGTCA AAGGTGCTAA ACGGGAAGAC TTCCCGCTAC CTGAGATATT AGCCAAGGCG
ATGACAGTTG AGCAGCGTGC CAACTTGCCG GGTCGTGGTT ATCCTGAGAT CCCAAAACCC
GAACAAGCCT ATTCACCTGA ACGGGGTAAA GAGGTCTATG TCGCCCATTG CCAAACTTGC
CACAGTGTTG ATGGCCAAGG TCAAGCGATT GCAGGCGTGT ATGCGCTGCC ACCGCTGTGG
GGACCTAAGA GTTACAACTG GGGTGCCGGA ATGCACAGGG TCAATACTGC TGCATTCTTC
ATCCATGAAA ACATGCCTTT TGGTAAGAGT ATGCAGTTAA CTAACCAACA GGCTTGGGAC
GTTGCAGCTT ATATCAATTC CCACGAGCGT CCACAGGACC CACGTAGCAA AGGTGATGTG
AAGCAAGCGC AGGAGAAATA TCATAATGAC AGCGATTACT ATGGTGTCGA GGTCGATGGC
AAAGTGTTAG GCACTGAGGC CTATCCGATT TTTCCTAAGA AGTCATAG
|
|---|
| Protein sequence | MKYSAMLLLA AMGSLTVQAQ AESDPLQERP DKQAPLPSFP KIPDQTYLVP RPLSAIPEGA
FGDKVRLGYQ LFVNTQQLRD KYVGNELNCT NCHMDAGRKA NASPLWGAYF AYPAYRKKDN
KVSSFEERIQ GCFNYSMNGK APASGSPELV ALSAYAYWLG MGGLMDEANI SGPVPELSDA
ELVKGAKRED FPLPEILAKA MTVEQRANLP GRGYPEIPKP EQAYSPERGK EVYVAHCQTC
HSVDGQGQAI AGVYALPPLW GPKSYNWGAG MHRVNTAAFF IHENMPFGKS MQLTNQQAWD
VAAYINSHER PQDPRSKGDV KQAQEKYHND SDYYGVEVDG KVLGTEAYPI FPKKS
|
|---|
| |