| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0541 |
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| Symbol | |
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| ID | 5370110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 621531 |
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| End bp | 622589 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828746 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001364772 |
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| Protein GI | 152999091 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGG ATCAACAGTT TGCCCGTTTA GTAAAATTCG CCATGTTCGG CTTTGTGATG
GTTTTTGGCT ATTTTATGCT TGCCGATACT ATGATGCCAT TGACGCCGCA AGCGATGGCG
ACGCGTGTGG TGACTAAGGT TACGCCGCAG ATCAGCGGCA AAATTCAGAC CATAGCCGTG
ACGAACAACC AAGCGGTTGC CAAGGGCGAT TTGTTGTTTC AAGTCGATCC CGCGCCCTAT
GAGTTAGCGG TATCTCAAGC TAAATTAGCC TTAGAGCAAG CTCGCCAAGA CAATGCCGAG
TTAGATGCCT CGCTGCTTGC CGCGAAGGCC GACGTCAATG CCAACAAAAC TACGTCACAA
CAGAAACGCA GCGAAGCTAA GCGCCTCGAT GCTCTGTATG CCACCCATGG TGTATCGCAG
CAGCAAAGGG ATCAGGCCGA TAGTGATGCC GCCGCTGCGG AAGCCAATTT GCTCGCCGCC
AATGCGCGTT TAGAAAAACT TAAGGTGAGC CGTGGCAGTT ATGGCGAAGA GAATCTTAAG
GTACGTCAGG CACAAAACCA TCTAGCCCAA GCTGAGCTCA ATTTGTCTTA CACTCAAATC
CATGCCGATC AGGACGGGAT AGTGACTAAC CTGCAGTTAG AAGTCGGGAG TTTTGCGACT
GTGGGGCAAC CTCTGTTAGC CGTGGTATCG GATAAGATTG ATATTATTGC TGATTTTCGT
GAAAAGAGTC TGCGTGGCGT CAATGCTTCA TCGACCGCTT TGATTGCGTT CGATGGCGAA
CCCGGCCGTT TATATCGGGC GACGGTGAGC AGTGTCGATG CGGGCGTGAG TGCGGGGCAA
TTCGATGCCA ATGGCCGTTT AGCGGCGCCG CAGGAATCTG ATCGTTGGGT GCGTGATGCC
CAAAGATTGA GACTGCATTT GGAGTTAGAT GGGATGGCGA TGAACAGCTT GCCAGCTGGT
GCGCGCGCAA CCGTACAACT GCTGCCAGAG AATAGCCTGT TTAGTCTGCT GGCTAAAGTG
CAGATTAAAG TCATTAGCCT GCTGCACTAT ATTTATTAA
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| Protein sequence | MTPDQQFARL VKFAMFGFVM VFGYFMLADT MMPLTPQAMA TRVVTKVTPQ ISGKIQTIAV
TNNQAVAKGD LLFQVDPAPY ELAVSQAKLA LEQARQDNAE LDASLLAAKA DVNANKTTSQ
QKRSEAKRLD ALYATHGVSQ QQRDQADSDA AAAEANLLAA NARLEKLKVS RGSYGEENLK
VRQAQNHLAQ AELNLSYTQI HADQDGIVTN LQLEVGSFAT VGQPLLAVVS DKIDIIADFR
EKSLRGVNAS STALIAFDGE PGRLYRATVS SVDAGVSAGQ FDANGRLAAP QESDRWVRDA
QRLRLHLELD GMAMNSLPAG ARATVQLLPE NSLFSLLAKV QIKVISLLHY IY
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