Gene Shew185_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0540 
Symbol 
ID5370103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp621049 
End bp621522 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content49% 
IMG OID640828745 
ProductMarR family transcriptional regulator 
Protein accessionYP_001364771 
Protein GI152999090 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG AATTAGAGCG ATTGAAAGAG TTATCACTGG CAGAGCATTT AGGCCGTCTG 
CATCGATTGT GGCGTACCGT GGCCGATGTC GAGCTGGCAC CTTTGGGATT AACTCATCCC
CGCTGGACGG CATTGTGGAA ATTACTGCGT TTAGGCGACA GCGTGAGCCA GAAAGTGTTG
GCCGATGCCT TAGAAATTGA ATTGGCTTCG TTAATGCGCA CCTTAGGGCA ATTAGAAGAG
CAAGGTTTAG TCGAGCGTCA TTGCTGCGAC AAAGATAAGC GCGCAAGGAT TGTAACGCTA
ACACCTGCGG GATTGGATGT ATTAAAGCAA ATGGAGGCGC GGATAATTCA GGTGCGCCGT
GAGTTATTAG CTGGGATCAG TGCCAGCGAG CTCAGCGAAT TTGAACGCAT TATTAGCCTG
ATTAGTGATA ACGCCAGCGC CAAATTGGCC AAGGCAACAG CAACCATTTT GTGA
 
Protein sequence
MQKELERLKE LSLAEHLGRL HRLWRTVADV ELAPLGLTHP RWTALWKLLR LGDSVSQKVL 
ADALEIELAS LMRTLGQLEE QGLVERHCCD KDKRARIVTL TPAGLDVLKQ MEARIIQVRR
ELLAGISASE LSEFERIISL ISDNASAKLA KATATIL