| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0536 |
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| Symbol | |
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| ID | 5369458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 614178 |
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| End bp | 615341 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828741 |
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| Product | O-succinylhomoserine (thiol)-lyase |
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| Protein accession | YP_001364767 |
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| Protein GI | 152999086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGC GTCAATTAGC CACACTGGCA GTGCGTCAGG GTATCGAAAG CGATACTCAA
TATGGCGCAG TTGTGCCACC GATTTATTTG TCGACTAATT ACGCCTTCGA TGGTCATAAA
AATCCTCGCG AATTCGATTA CAGTCGTTCA GGCAACCCAA CACGCTGTAT TTTAGGCGAA
GCATTAGCGC AATTAGAAAA GGGCGCCACT GGCATAGTGA CCTGCACTGG CATGGCGGCC
ATCACCTTAG TGACCACTTT GCTCGGCCCC GATGATCTAT TGGTGGTGCC CCACGATTGT
TACGGCGGTT CTTACCGTTT ATTTACTAAT TTGGCGAAGA AAGGCCAGTT TAAGCTGATT
GTGGTTGATC AAACCGACAG CCAAGCGTTA ACCGCAGCGA TCGCGCAAAA TCCTAAGATG
GTGTGGCTCG AAACCCCGTC TAACCCGCTA TTGCGTGTGG TGGATATCGA GGCTATTGCT
AAGGCAAGCC ATGAGGTCGG CGCGCTGGTG GTGGTCGATA ACACTTTTTT ATCGCCGATA
TTGCAACAAC CCCTATTGTT AGGCGCGGAT ATCGTTATCC ACTCCACCAC TAAATACATC
AATGGTCACA GCGATGTGGT TGGCGGCGCT GTGGTTGCCA AAGATGCACA AATTGGCGAA
AGCTTACATT GGTGGTCGAA CACGTTAGGC TTAACGGGAT CGGCATTTGA TAGTTACTTA
ACCCTGCGCG GCCTACGTAC CTTAGCGGTG CGAATTCGTG AACATCAAGC CAATGCCCAG
CGCATTGTTG AGGTGTTAAC GCAAAGCTCT GTGGTGAGCA AAGTTTATTA CCCTGGTCTT
GCGGATCACC CAGGTCATGC CATTGCCGCC AAGCAACAAA AGGGCTTTGG CGCTATGCTG
AGTTTTGAGC TCAAAGGCGG TGAGGCCGAA GTGGTGGCCT TTTTAGGTGC ACTCAGCTTA
TTTAGCGTGG CGGAAAGTTT AGGTGGCGTT GAAAGTTTAG TGGCCGTGCC CGCAACTATG
ACCCACAGAG CCATGGAGCC GCAGGCGCGC TTCGAGGCAG GCATTAAGGA CACCCTATTG
CGTCTATCGG TGGGTATTGA AGATGCCGCC GATTTAGTTG CAGATATTCA AGCAGGATTA
GCCGCCGTTG CGGCTTGTCA GTAG
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| Protein sequence | MAERQLATLA VRQGIESDTQ YGAVVPPIYL STNYAFDGHK NPREFDYSRS GNPTRCILGE
ALAQLEKGAT GIVTCTGMAA ITLVTTLLGP DDLLVVPHDC YGGSYRLFTN LAKKGQFKLI
VVDQTDSQAL TAAIAQNPKM VWLETPSNPL LRVVDIEAIA KASHEVGALV VVDNTFLSPI
LQQPLLLGAD IVIHSTTKYI NGHSDVVGGA VVAKDAQIGE SLHWWSNTLG LTGSAFDSYL
TLRGLRTLAV RIREHQANAQ RIVEVLTQSS VVSKVYYPGL ADHPGHAIAA KQQKGFGAML
SFELKGGEAE VVAFLGALSL FSVAESLGGV ESLVAVPATM THRAMEPQAR FEAGIKDTLL
RLSVGIEDAA DLVADIQAGL AAVAACQ
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