| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0523 |
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| Symbol | |
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| ID | 5372161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 600753 |
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| End bp | 601331 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640828728 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001364754 |
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| Protein GI | 152999073 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA CCATTCTTAC TTTGGCCGCC ATTATTTCTT TAGCTTCTGT TAGTGTTTAC
TCTCATGCGG AGAACATGAA AAATAATGAT GTCGCAGAAA ATGGCATTTA TGTTGGTGCT
AACTATGGTT ATTTAAAAGT TGATGGTAAA GATGACTTCG ATGACAATAG CGATGTTATT
CAAGGACTTG TTGGTTATCG CTTCAACCAA TATTTAGCTA TCGAAGGCGG ATACGTCAAC
TTCGGTGATT ATGGCAATAG CCTTTCTAAT GCAGAAACAG ATGGTTATAC CGCTGCGCTA
AAAGTCTCAT ATCCCATTGT AGATCGCGTT GAGTTGTACG CTAAAGGTGG GCAACTATGG
TATTCCACTG ATTATGATGT GTTAGGTTTT TCTGGAAATA AAGATGATGA AGGTGTGTTC
GCCGGTGCCG GTGTTGCATT CAAAGTCACA GATCGATTCT TAATTAATGC CGAGTACACT
TGGTATGATG CAGGAATTAC CGTTGAGAAT GTTAGCAACG GTGCAGATAC AGACACAGAC
TTTAAACAAG CCAGTTTAGG TGTTGAATAT CGATTCTAA
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| Protein sequence | MKNTILTLAA IISLASVSVY SHAENMKNND VAENGIYVGA NYGYLKVDGK DDFDDNSDVI
QGLVGYRFNQ YLAIEGGYVN FGDYGNSLSN AETDGYTAAL KVSYPIVDRV ELYAKGGQLW
YSTDYDVLGF SGNKDDEGVF AGAGVAFKVT DRFLINAEYT WYDAGITVEN VSNGADTDTD
FKQASLGVEY RF
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