Gene Shew185_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0502 
Symbol 
ID5373679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp569176 
End bp573501 
Gene Length4326 bp 
Protein Length1441 aa 
Translation table11 
GC content48% 
IMG OID640828707 
Producthypothetical protein 
Protein accessionYP_001364733 
Protein GI152999052 
COG category[S] Function unknown 
COG ID[COG3164] Predicted membrane protein 
TIGRFAM ID[TIGR02099] conserved hypothetical protein TIGR02099 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGCAC CTTTTACTGC AAAAAAACTA AGTCGTTTTT GTTGGCAATT TATCGCGCTA 
ATCTTAGTGC TATTTGCGCT TGCAGTGAGT TTGATCCGTG GCTTATTGCC ACAGGTTGAT
GGGGTGCGTC AGCAACTGGT TGATTACGTA AAAAGCGAAT ATAAGGTTGA TGTGCAAGTG
GGGGAATTAT CCGCCCACTG GCAAGCGTTT GGTCCGGCAA TTAACATAGA TAATCTAGTT
ATCCCGCCGC AGGAACAACT GCCCGTCACT CTGATTATTA AGAATGTGCA AGTGAAGTTA
GATTTTTGGC AATCGCTGCT GACCTTCACG CCGCGTATCG AAGATGTCAA TTTTGATGGT
GTCCATATCG CGTTAAACAT GGACAAGCTG ACCGAAAATA ATCCCGCCGC AACCAATAAA
GCGCCGCAAG TTGATTGGCT CTATGCATTA TTGCTCAAGC AACTCGACAG ATTTTCGTTA
ACCCATGCCA CAGTGCAACT GCTCAGCTTG CGCCAAGAGT TTCGCCCGAT CCATATTCGC
CAGCTAAATT GGCGCAATAA TGGCGAGCGT CACCGCGGTG CAGGGGAACT GTATCTTGAT
GATAATGCCT CTGAGCATGA ATCTCTGGGA TTACAGTTAG ATCTCAATGG CGATGGCGCG
AATCCCGACA GCTTAACGGG GCAGATTTAT CTGGCGGCTA ACTCATTAGA CTTAGGTGAG
TGGGCATCGC GTCAGCCTAA TCCCTATGAT GCGAGCAAAA AATTACCCTT AGAAGGGGTC
GTTAATCTTA AGGCTTGGCT TACGTTTGCC GATCGCAGCA TCAGTTCTGC CATGGTGCAT
TTTGAGCCGA GCTGGTTGCA ATGGACCTTA AAGGAAGTGC CACAACGATT TGAAATCCAA
GCGGGTGATA TCGTTTGGCA GCCAAAGGAC TCTGGCTGGG AAGTACAGAG CTCAGGGCTC
GACTTTGTCA CTAACGGTGA GCATTGGCCG CAGTTAACGC TGGCGGCTAA GCGTCAACAT
GACGAATTCT TTGCCTATGT GAATCAAGTT AACACTCAAA ACCTGTTACC CCTGTTACCG
CTATTTCCCG GAGTCGATAA AGCCGTATTG CATCAATGGC ATGCTTTATC GCCTGAAGCC
AGTATTGGGC CCATTCGACT GTATCAAAAG GCCGATCAGC CTTTGCTCGC TACTTCTGAG
GTGAAACAGT TACATTGGCA GAAGGTCGAC GGTATCCCCA ATACCCATCC TTTGGATCTG
AACTTACATT GGCAAGACAA GACGCTGTCT TTTTCTTTGC CAGCACAAGT TTATAGCGTG
GATTTTGGGG ATGAATTTTC GGCGCCACTC GTCTTTAACG GTGCGGCAAT TGATGGTCAG
TTCAATACTG CAGAGTTGAG TTTAAACGTG CCGCAGTTGC AGCTTGAGAA CGATGATATA
AGCTTAGATG CTGCGCTTAA ATTGGATTTC AGTGCTGCGG CGCATATGGC GCTGGCTGCC
AATGTTCATA TCAATAATGT CGCCAATGCC GACAAGTATT TCCCCAATAA GGCGATGGGC
GAATCGCTGG CTGAATATTT GGATACAGGG CTTAAAGCGG GTCAGACTCA AGATGCACAG
GTTGTTTGGC GTGGTCCGTT AAGCGGTTTC CCTTTCGATG ACAATAGCGG CGTGTTTCAA
GCGGCATTTA CTTTAACGGA TGCCCAATTC CAGTTTCAAC CCGATTGGCC TGCTGTCACA
GACTTATCCC TTAATGCTTT GTTTGAAAAT GCTCGTATGG ATCTTTGGCT CAACCAAGGC
AAGCTGATGA ACGTGGATGC CACGGGTGCC CATGTATTTA TTCCCGCGAT TGGCGAGCAC
ACGCTGCTGA AGATTGAAGC CGAACTTGCT ACCCAAGGCA GCGCGGCGAC TGAAGTGTTA
CAAGCCTCGC CTTTGGCGGG TTCAGTGGGT AAAACCTTAG ATGTCGTGCA AGTGCAAGGC
GCTGTGACTG GCAATTTGGA TATCAGTATT CCGCTGTATG ACGGAGGCGC AGAAGATATT
CGTGGTCAAA TTAGTTTTGA TAACACGCCT GTGTATATTG CCCAGCCCGG ACTGCAGCTT
AATGGCGTAA CGGGTATCGT CGACTTTACG AATGAGGTGG TGACAGGTAA AGGTATTAAA
GCGCGTTTGT TCGAACAGCC GCTCAACTTA ACCTTTGATA CTCAGCCTAA AGGCAAAGAT
TTCGGTCTTA ATCTTTTACT CAAAAGTCGT TGGGATCTGA ATCGTCTCCC CGAAGAATTA
CATAATCCTT TGAGTGATTT CTATCAGGGT AAAATCAGTT GGGACGGCGC TATGACTATG
CTGTTTACTG AAAAAGGTTA TCAAATTCAA GCCAAAGTAA CTTCGGATAT GGTTGGCACT
CAACTGTCAT TCCCAGGATA TTTTGCCAAA CCCGAAGATG AGCCGCGGCC CTTAGTCGCT
GAATTTGTTG GCGATCAAAA TGATGCTACC TTAGATCTGA AGCTAGCGAG TCATGCCGAG
TTTATCGGTG GTTTCGATAC TAAAAAAGGC GCTAACTTTA GTTATTTTGA TTTGTTATTG
GGGCGTTTGT TCGATGAGGA TGAAGCCCGA AATACTGAAA AAGGTCATAT TCAAATTGAC
CTTGGTAAGG CAAAACTAGC CGACTGGTTA CCTGTGATTA ATGCCTTTGT TGGCCAAGAA
AAATTACCTA AAACCGGCAT CCTCGTCGAC GATATCGACC ATGACAGTTT ATTCCCTGCC
GTGGCGAGTA TCGATTCCCA TATTGGCCGC CTCGACCTTT TAGGGCAACA GCTGACCGAG
CTTAGGCTCA ATGCGAAACC CAATGAAACG GGCTGGCGTT TTAATACCGT TGCCAACGAA
TTTGACGGCT GGGTCGATTT CTATCCCAAC TGGCGAACCC AAGGCCTCAA AGTTGTGGCG
AGCAAATTCT ATTTTTCACC TGAGGTTAAG CCGGATACCG ATGCCGATTT TGCCAGCGAT
CAAGTGCTCA CTAACCTGCC ACCCGTGGCC GTGAATGTGG AAGATTTTCG TTTCTTCGAT
AAACCTTTTG GCAAGCTAGT CTTGCAGGCG AGCCCCCAAG CGGCAGGCTA TAAAATCCAA
ACTCTGTCGT TGATTACGCC CAATGTGACC TTGCAGGGCA GTGGTATTTG GCAGCAACAG
GCAGGGCAGA ATAAAACTGA TCTGAGTGTT GAATTGAACG CCACTCAGTT TAATTATCTC
TCGGCTCAGT TGGGCATAGA TCCCGGCGTC AATGAAGCGC CATTAAAGGT TAACGCGGAT
TTATCTTGGC AAGGTGCGCC TTATGCTTTT TCCCTCGAAA CCTTGAATGG CAAGGTGAAG
TTCGACTTAG GCAAAGGGCA TTTATCTCAG GTGAGTGATA AGGGCGCACG CATTTTCTCC
CTGTTCAGCT TAGATTCTCT GGTGCGAAAA CTGTCGCTGG ATTTCACCGA TGTCTTCGGT
CAGGGGATGT ATTTCAACTC CTTCAATGGC AATCTGCAAA TTGATAACGG CGTGGTGAAA
ACCACTGATA CCGAAATGGA TGCGATTGCG GGCAATATGA AGGTCCGTGG CTATACGGAT
CTCACCACTG AAAGTTTGAA TTACGATATC CGTTTTGTGC CGCAATTGGC CTCGAGTGTA
CCGACTGTGG TATTGCTCAG TACTAGTGCG TGGACACTCG GTCTGGGCGC ATTTGCCCTG
ACAAAAGTGC TTGAGCCTGT GATTGAAGTA ATTTCAGAAA TTCGTTTTCG GGTGACCGGC
ACTATGGCTG AACCTGTGGT TGAAGAGCTG GAACGTAAGA GCAAAGAGAT TGAAATTCCC
GAGGCTATTT TACCTGTTGT CGGAGTTGAA CGCCCAGCGG CGCCAACCGA AGCTGCGAGT
CATAACGCCG ATATCACTCA GCCGGTAGAA GCGAAATCGA CCGAAGCTCA ATCAACAGAA
GCTAAGCCAA CTGAAATTAA GCCAACTGAA ATTAAGTCAA CTGAAATTAA GCCAACTGAA
GTCAAGCCGA GCAACGCTAA ATCTAAGCCA CAAGCAGTTA AGCCTGAAGA GGCCAGATCT
GAAGAATCAA AGTCAGAAGA GCCAAAGCCA GCCACAGATC AAATTAAAGC GCCCGATTTA
AAGTTGGTGC AACCTCAAGC AACGCCTTCG CTTGAAGTAC CCGTCACGCC CGCCACACCA
GAGAATCAGC CAGCAGTAGA ACCGATTAAG CAAATTCAGG GAGATCAGAA TGCACATCAG
CCTGTTGCAA TGTCAGAGCA GTCGCGACGT CAGCGCCAAT CTGCTGTTTA TCGAATCGCA
GCTTAA
 
Protein sequence
MAAPFTAKKL SRFCWQFIAL ILVLFALAVS LIRGLLPQVD GVRQQLVDYV KSEYKVDVQV 
GELSAHWQAF GPAINIDNLV IPPQEQLPVT LIIKNVQVKL DFWQSLLTFT PRIEDVNFDG
VHIALNMDKL TENNPAATNK APQVDWLYAL LLKQLDRFSL THATVQLLSL RQEFRPIHIR
QLNWRNNGER HRGAGELYLD DNASEHESLG LQLDLNGDGA NPDSLTGQIY LAANSLDLGE
WASRQPNPYD ASKKLPLEGV VNLKAWLTFA DRSISSAMVH FEPSWLQWTL KEVPQRFEIQ
AGDIVWQPKD SGWEVQSSGL DFVTNGEHWP QLTLAAKRQH DEFFAYVNQV NTQNLLPLLP
LFPGVDKAVL HQWHALSPEA SIGPIRLYQK ADQPLLATSE VKQLHWQKVD GIPNTHPLDL
NLHWQDKTLS FSLPAQVYSV DFGDEFSAPL VFNGAAIDGQ FNTAELSLNV PQLQLENDDI
SLDAALKLDF SAAAHMALAA NVHINNVANA DKYFPNKAMG ESLAEYLDTG LKAGQTQDAQ
VVWRGPLSGF PFDDNSGVFQ AAFTLTDAQF QFQPDWPAVT DLSLNALFEN ARMDLWLNQG
KLMNVDATGA HVFIPAIGEH TLLKIEAELA TQGSAATEVL QASPLAGSVG KTLDVVQVQG
AVTGNLDISI PLYDGGAEDI RGQISFDNTP VYIAQPGLQL NGVTGIVDFT NEVVTGKGIK
ARLFEQPLNL TFDTQPKGKD FGLNLLLKSR WDLNRLPEEL HNPLSDFYQG KISWDGAMTM
LFTEKGYQIQ AKVTSDMVGT QLSFPGYFAK PEDEPRPLVA EFVGDQNDAT LDLKLASHAE
FIGGFDTKKG ANFSYFDLLL GRLFDEDEAR NTEKGHIQID LGKAKLADWL PVINAFVGQE
KLPKTGILVD DIDHDSLFPA VASIDSHIGR LDLLGQQLTE LRLNAKPNET GWRFNTVANE
FDGWVDFYPN WRTQGLKVVA SKFYFSPEVK PDTDADFASD QVLTNLPPVA VNVEDFRFFD
KPFGKLVLQA SPQAAGYKIQ TLSLITPNVT LQGSGIWQQQ AGQNKTDLSV ELNATQFNYL
SAQLGIDPGV NEAPLKVNAD LSWQGAPYAF SLETLNGKVK FDLGKGHLSQ VSDKGARIFS
LFSLDSLVRK LSLDFTDVFG QGMYFNSFNG NLQIDNGVVK TTDTEMDAIA GNMKVRGYTD
LTTESLNYDI RFVPQLASSV PTVVLLSTSA WTLGLGAFAL TKVLEPVIEV ISEIRFRVTG
TMAEPVVEEL ERKSKEIEIP EAILPVVGVE RPAAPTEAAS HNADITQPVE AKSTEAQSTE
AKPTEIKPTE IKSTEIKPTE VKPSNAKSKP QAVKPEEARS EESKSEEPKP ATDQIKAPDL
KLVQPQATPS LEVPVTPATP ENQPAVEPIK QIQGDQNAHQ PVAMSEQSRR QRQSAVYRIA
A