Gene Shew185_0499 details

Gene Information

• Locus tag: Shew185_0499
• ID: 5370256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 566387
• End bp: 566875
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640828704
• Product: rod shape-determining protein MreD
• Protein accession: YP_001364730
• Protein GI: 152999049
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.000751772
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTC AAGCAGCCAA TGGGCGCTTC ATTGTTTGGG TGACATTATT TATCGGCGTG 
ATCAGCCAGA TCATGCCTTT GCCGAGTGTG GTCGATGCTT GGCGTCCCGA CTGGTTGTTG 
ATGATTGTGC TCTACTGGTC TATCGCATTA CCCCATAGAT ACAACATTTT AACCGCTTGG 
GTCTTAGGCC TAGTGTTGGA TATTTTATTG GGTGCCACCT TAGGTGTGCG CTCTTTAGCG 
ATGTCTTTGG TGATTTATGT CGCCATCTTG CATTGCCAGC GATTGCGAAA TTTCCCTAAG 
TGGCAACAGT CGTTGGTGAT CATGCTGCTC ATTTGTATGT ATCACTTAGT GATTTACTGG 
GTCGAGTTTG TCATGCAAGA GGCGGTCTTC GATACGGATC TATTCTTACC TGCGATTTCA 
GGATTAGTGA TCTGGCCTTG GATATTTTGG ATTCTACGTC GGGTTCGACG TCATTATAAG 
GTTCGCTAA 

 

Protein sequence

MSFQAANGRF IVWVTLFIGV ISQIMPLPSV VDAWRPDWLL MIVLYWSIAL PHRYNILTAW 
VLGLVLDILL GATLGVRSLA MSLVIYVAIL HCQRLRNFPK WQQSLVIMLL ICMYHLVIYW 
VEFVMQEAVF DTDLFLPAIS GLVIWPWIFW ILRRVRRHYK VR