| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0494 |
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| Symbol | |
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| ID | 5372992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 558007 |
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| End bp | 558855 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828699 |
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| Product | MSHA biogenesis protein MshO |
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| Protein accession | YP_001364725 |
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| Protein GI | 152999044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0709841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTCTT TTTCAGCAAA GCGTATGCAA ACATCCAAAC GGGGTTTTAC CTTAGTCGAG
ATGGTCACAG TTATCTTGAT TCTGGGGATT CTTGTGGTCG GGGTGAGTAG TTTTATTATT
TTTGGTACGC GGATTTTTGT TGAGTCGAGT TCAGTCGATC AAGTACTAAG CCAGAGCCGT
TTTGCCGTTG AGCGAATGAC CCGTGAGCTG CGTAGTGCTT TGCCTAATAG TGTGCGAGTT
AATACCGATT CGCTGACCTA TCAATGTATC GAGTTTGTGC CTATCGAAGC CAGCACGACT
TATCTCACTA TGCCAATCAT CCCCGATGCT GCCGCGAGTA CTGGGATAGT TATTCTAGAT
AATACCGCGA GTGCGATTCG CGTGAATCAA TTCGCTTGGA TCTATCCCTT GGTTGATGCC
GATGTGTATA ATAGCGCGAG ACAAAAACTG GCACAGGTTA AAACGATTGC TATCTCGGGT
AATCAAGTGA CACTGACTTT TACTGCGCCA ACACGTTTTT CCGAAGCATC ACCACGACAA
AGGATCTATT TTGGTTCGAG TCCTGTGAGC TATTGCTTTG AAAAGGGTGC AAGCGGTAAT
GATTTACAAA TAGTGCGTTA TGCTGGTTAT AACTTTAATA CCGTTCAACC AAATCCAGCC
ACTATGGGTA CGGGCGTGCT AATGGCGCAA AGTGTGGCGA ATCGTCTCGA TAATAGTAAT
GACTTGCCGT TGATCTTAAC GCCATCGAGT TTAGTCAATA ATGCCATGGT GCACTTGCAG
CCAAGATTTA ATGTCAATGG TGAGACGTTC CAATATCGAC ATCAAGTGCA GGTGATCAAT
GTTCCTTAA
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| Protein sequence | MGSFSAKRMQ TSKRGFTLVE MVTVILILGI LVVGVSSFII FGTRIFVESS SVDQVLSQSR
FAVERMTREL RSALPNSVRV NTDSLTYQCI EFVPIEASTT YLTMPIIPDA AASTGIVILD
NTASAIRVNQ FAWIYPLVDA DVYNSARQKL AQVKTIAISG NQVTLTFTAP TRFSEASPRQ
RIYFGSSPVS YCFEKGASGN DLQIVRYAGY NFNTVQPNPA TMGTGVLMAQ SVANRLDNSN
DLPLILTPSS LVNNAMVHLQ PRFNVNGETF QYRHQVQVIN VP
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