| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0476 |
|---|
| Symbol | |
|---|
| ID | 5372174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 539932 |
|---|
| End bp | 540981 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640828681 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001364707 |
|---|
| Protein GI | 152999026 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATA TAGTGAAATC ATTAGGTCTA CTCGCGTTAG TGTGTAGCGC ACCGAGCATG
GCACAAGTCT CCCATGTGAG CGTTAACAGC CGCATGTTTG AGTTAGGTGG TTATCCTAAA
CTCAGGGTGA ATGTGATTGC GGATAATCAA GACATGTCGC GCTTAGAGTT TGTAGTGCAG
CAAGCCGGCA GCGAAGAAAA GTTAATGGTT GAGGCGCTTA ATCGCTTTTT AGTTTTGCTC
ACGGGTGTTG AAGATGTAAA AGATGACAAG GCTAAACTCT TAGTGAGGGA GTATCGACTC
GACCGATGGT ATGAGGTCAA AAGTATCAAT CTATTTGGTG AGGCTAAGCC AACATCGGCC
GCGCTAACCG CAAAAGCGGC ATCGGGCAGT AAAAATACGA CGACAGCGCT GGTGCCAAAG
CGAGCGGATA AAGTGAATGC TCAGCCTGTA AAAGTGGCCG CTGAATCCAC GCGAGAGTTG
GAGGCTAAGC CTGTGACGGC GGTTATCGCG GCTGTAAATA CTCATGTCGA TACTAAGCCC
AGAGTGCCAG CGGCTGAAGT GGTGACTGGT TTTAAATTTC CTGAAGTAGC GAATGAGCAA
AATACACCGG TTACCGAGAT AAAGCCTGTC GTTAAAATCT CTGAACCTGT TGCTGCTAAA
ACAACGCCTG TTGAAACTGT AGTACCTGAG ACTGTTATGT CTGAAGTCGT AGCTACAGAA
ACTGCGAAGA CAACACATAG CGAACTCAAG GCGAATGCTG TTGAAACGTC CCCAACAGCT
TCGCAGACAC CTGAACATTG TCAGTTAACT TATCTTGCTG GTGAGACCTT GTGGCGTATC
GCCAATCGCT ATGCCAACGA TTGGGACGTG AGTGTTTATG GCGCTATGCT GGCGATCTAC
GAGGCGAATC CAGCGGCTTT CTCAAAAAAT AAAATCAACG CACTCAAGAG TAATGCGGCT
CTGTCCTGTC CTTCAAAAAT GATTTTGGCA CAGCATGCTA ACGCCAAAGA GGCGCTGGCG
ATGTTTGAAG CTAAAGAGGC GGAAAAATGA
|
|---|
| Protein sequence | MANIVKSLGL LALVCSAPSM AQVSHVSVNS RMFELGGYPK LRVNVIADNQ DMSRLEFVVQ
QAGSEEKLMV EALNRFLVLL TGVEDVKDDK AKLLVREYRL DRWYEVKSIN LFGEAKPTSA
ALTAKAASGS KNTTTALVPK RADKVNAQPV KVAAESTREL EAKPVTAVIA AVNTHVDTKP
RVPAAEVVTG FKFPEVANEQ NTPVTEIKPV VKISEPVAAK TTPVETVVPE TVMSEVVATE
TAKTTHSELK ANAVETSPTA SQTPEHCQLT YLAGETLWRI ANRYANDWDV SVYGAMLAIY
EANPAAFSKN KINALKSNAA LSCPSKMILA QHANAKEALA MFEAKEAEK
|
|---|
| |