Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0471 |
Symbol | |
ID | 5372610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 533324 |
End bp | 534262 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640828676 |
Product | band 7 protein |
Protein accession | YP_001364702 |
Protein GI | 152999021 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0882327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC CATTAGATAC AGATTTGATT GTGATGGCAA TTTGGGGACT GATTTTTGCC ATTTTCGTGA TTAAGCTTTT CCAATCAATT CGCCTAGTAC CCACTAAATC GGCTTATATT GTTGAGCGTT TAGGTAAGTA CCACAGCACC TTAGATGCGG GTTTCCATAC CTTGATCCCC TTTGTGGACA AAGTCGCTTT CATTCATGAT TTGAAAGAAG AGACCATCGA TGTACCGCCG CAGGAGTGTT TTTCGAGCGA CGAAGTTAAC GTTGAAGTGG ACGGGGTGAT TTATATCTCT GTGACCGACC CAGTCAAAGC CAGTTACGGT ATTACCGATT ATCGCTACGC GGCTATCCAG TTGGCGCAAA CCACCACACG CTCTGTCATT GGGACGCTGG ACCTTGACCG CACGTTCGAA GAGCGTGATG TGATTTCTGC CAAGGTCGTG CAGGTATTAG ATCAAGCCGG TGCCATGTGG GGAATACGCG TGCATCGTTA TGAGATTAAA AATATCACCC CACCTGAAAC CGTTAAAAAT GCCATGGAAA TGCAAGTGAA TGCTGAACGT GAGCGCCGGG CATTATTGGC TAAGAGTGAA GGCGACAAGC AGAGCAAGAT TAACCGTTCA GAAGGTGTTA AAGCTGAGAC GGTAAACCGC TCTGAAGGTG AGATGCAGCG ACGTATTAAC GAAGCTGAAG GTAAGGCTGA GGAAATTTTA ACTATTTCCC GTGCGACGGC GGAATCGATC GAACGTCTTG CCACAGTTAT TGCTGCGCCG GGTGGCCACA ATGCCCTGCG GATGCAACTT GGTGAACAGT ACTTTAAACA GCTCGATGGC TTAAGCCAGA AGAATAGCCG AGTGGTATTG CCGGGTAATA TGGTGGATTT CGATTACTGG ATGAATAGCA TAGGCTTAAC GGAAGAAAAG CCGAGCTAA
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Protein sequence | MNIPLDTDLI VMAIWGLIFA IFVIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHTLIP FVDKVAFIHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VTDPVKASYG ITDYRYAAIQ LAQTTTRSVI GTLDLDRTFE ERDVISAKVV QVLDQAGAMW GIRVHRYEIK NITPPETVKN AMEMQVNAER ERRALLAKSE GDKQSKINRS EGVKAETVNR SEGEMQRRIN EAEGKAEEIL TISRATAESI ERLATVIAAP GGHNALRMQL GEQYFKQLDG LSQKNSRVVL PGNMVDFDYW MNSIGLTEEK PS
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