Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0465 |
Symbol | |
ID | 5370875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 527951 |
End bp | 529126 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640828670 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001364696 |
Protein GI | 152999015 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000104832 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GACTATTATG ACATGGACAC ATTCAAGCGT ATTGAAGCGT TTGCCAAAGA CAAAGCAACC CCGTTCGTAG TGATTGATAC CAGTATCATA GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTACG CCAACGTTTA TTATGCAGTT AAGGCAAACC CCGCGGCCGA GATCTTATCT TTACTTAAAG ATAAAGGGTC AAACTTTGAT ATTGCCTCGA TTTATGAGCT AGATATGGTC ATGAATGTCG GCGTGACAAC CGACCGAGTC AGCTACGGCA ATACCATTAA AAAGCGTCAA GATGTACGTG CATTTTATGA GCGTGGTGTG CGTATGTATG CATCCGACTC AGAAGCCGAT CTGCGAATGA TCGCCGAAGA AGCTCCGGGA TCGCGTATTT ACGTGCGCAT TTTGACCGAA GGTACAGACA CGGCTGATTG GCCATTATCG CGTAAATTCG GCTGCCAAAA CGAAATGGCC TATGAGCTAT TAGTATTGGC GCAGGAATTG GGCTTAGAAC CTTTTGGTAT TTCGTTCCAC GTCGGTTCAC AGCAACGTGA TATCGGTGCT TGGGATTCTG CCATAGGTAA AGTGAAAAGC ATTTTCGACC GTCTGCGTGA TGAGCACAAT ATCACCCTGA AGATGATCAA TATGGGCGGC GGTTTCCCTG CTAACTATAT TGATAAAACC AATCAATTGG GTGTGTATGC CGAGCAGATT ACTCACTTCC TGAAGGAAGA TTTCGGTGAC GATTTACCGC AAATCATTCT GGAGCCAGGT CGTTCGTTGA TTTCTAACGC GGGGATTTTA GTGTCTGAAG TGGTACTGAT CAGCAAAAAA TCCTACACAG CGTTAGAGCG TTGGGTGTTT ACCGATGTGG GTAAATTCTC AGGCTTGATT GAAACGATGG ACGAGGCGAT TAAGTTCCCG ATTTATACTG ATCGTCAAGG CGAGCTGGAT AAATGCGTGA TTGCCGGCCC AACCTGCGAC AGTGCCGATA TCATGTATGA GCACTACAGC TATGGTTTAC CGAATGACTT AGCCATTGGT GACCGCATGT ATTGGTTAAC CGCTGGCGCT TATACGACGA CGTATTCGGC AGTGTGCTTT AACGGTTTCC CACCGCTGAA AGATTACTAT CTGTAA
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Protein sequence | MSQFQSIDVA DYYDMDTFKR IEAFAKDKAT PFVVIDTSII AKQYDDMVNS FPYANVYYAV KANPAAEILS LLKDKGSNFD IASIYELDMV MNVGVTTDRV SYGNTIKKRQ DVRAFYERGV RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLAQEL GLEPFGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN ITLKMINMGG GFPANYIDKT NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGIL VSEVVLISKK SYTALERWVF TDVGKFSGLI ETMDEAIKFP IYTDRQGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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