| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0463 |
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| Symbol | |
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| ID | 5372672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 526088 |
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| End bp | 526924 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640828668 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001364694 |
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| Protein GI | 152999013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.11026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAC CTGGACTCGA TCAGGAATTG CAGCAACTAC AAGGCGTTTA TCAGCTGATC
ACAGAGTTTT TAGTCACCTA TAGCTTCCAA TTGGTCGGCG CTTTGCTGAT CTTTTTACTG
GGGTTGTGGG TCGCCAGTAA GGCATCACGT TTAGTCGCGA AGCAGTTCGA AAAACACAAT
ATCGACATTA CCTTAAGCAA TTTTGTCAGT AACCTGATCC GCATTCTAAT CATCATCATG
GTCGGGATCA TCGCCCTCGG CAAGATTGGC ATCAGCATCA CCCCTATGGT GGCAGCCATT
GGTGCAGCCT CCTTAGGTGC TGGCTTAGCC TTGCAAGGCA TGTTGGCCAA CTATGCCGCC
GGCGTGACCA TTATCGTCAC CCGTCCTTTC GTTGTGGGAA ACACTATCGA AATCAAAGGG
GAAAGCGGCG TCGTTAAACG TATCCACTTA GGCATGACCA TTCTGAGTAA TGAGGAAGGC
GAGCAAATCA GCATTCCCAA TAAGCATATC GTCGGTGAGA TCCTGCATAA TTCCTTTAGC
AATAAACTGG TCGAAACCCA GTTTAATCTC AGTTACAACA CAGATCCCGA ACGGGCCATT
AGTGTGATCA CTGAGTTATT GAGCAACAAT CCCTATGTCT ATCAAGAGAC CATGCCCAAT
ATCGGCATCA ATGGTTTTAA TGCTATCGGG ATTGAAATGG GAGTGCGCTA TTGGGTGCCC
ACGCAAAGCT ATTTTCAGCA TAAATATAAG GTGAACTTAG CCCTCTACAA CGCCCTTAAG
CAGGCGGAAA TCGAGATTGC CTGCCCCATC AGGGAGATCC ATCTGCAAGA TAAATAA
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| Protein sequence | MITPGLDQEL QQLQGVYQLI TEFLVTYSFQ LVGALLIFLL GLWVASKASR LVAKQFEKHN
IDITLSNFVS NLIRILIIIM VGIIALGKIG ISITPMVAAI GAASLGAGLA LQGMLANYAA
GVTIIVTRPF VVGNTIEIKG ESGVVKRIHL GMTILSNEEG EQISIPNKHI VGEILHNSFS
NKLVETQFNL SYNTDPERAI SVITELLSNN PYVYQETMPN IGINGFNAIG IEMGVRYWVP
TQSYFQHKYK VNLALYNALK QAEIEIACPI REIHLQDK
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