Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0453 |
Symbol | |
ID | 5372328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 513924 |
End bp | 514835 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640828658 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001364684 |
Protein GI | 152999003 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCATT TAAACGATCT GCAATTAGCG CTGCGTATCG CTGCCTTAGA GAGTCTCTCG GCAGCCAGTA AAGAAATCGG CATGACGCCG GCAGCGGCAA GTGCCGCGCT GCAAAGATTA GAGAAAAAAC TAGGATGTCA GCTATTTGCT CGCTCGACGC GGCGCTTACA GCTCACAGAA GAAGGCAGGA TCTTTCTCGA TTCGGCGAAA CCCGCACTGG CGATTCTCGA AACCGCCAGC GCCAATTTAG CCGAACACAG GGGTGAGCTT AAGGGCGAAG TGCGTCTCGC CTTGCCTTCG GATATCGGTC GCAGTCAGAT CCGTGCTTGG CTCGATGAAT TGATGGACAC CGCCCCAGAA CTGACAGTGC AGCTGTATTT TGGCGATCAT ATGACAGACT TAATCGACCA AAATATCCAT TTGGCTTTGC GCTATGGCCA GCTTGACGAC TCAAATCTGA AAAGGCGTCA GCTCGCCATG ACCCCAAGAG TACTGGTCGC CTCACCCACT TATCTGGCAC AACATGGCAC ACCAAGCACG CTAAATGAAC TTAGCCAACA CGCAGTACTG ATCTTAAATC GCGGCGGTGA GCCGTGGCAG AAATGGAAGT TAAGTCATAA CGGCGCGCCC GTTGAAATCG AAGTCAGGGG CCAACGTTTC TGTAACGATG GCGCAGTGAT CCGCGACTGG GCACTCTCAG GTCGTGGGAT TGCCTATAAG AGTTGGCTCG ATGTGGCGCA GGATGTGACC GAAGGCAGAC TCAACCTAGT GCTAGCCGAT AAAATAGCCC CGCCTATCCC ACTGCAATTG GTATACCTAC AAACCGATTA TCCCAGCCAT AAGATCCGTC GCACCATAGA GTTTTTAGTA GAAAAGCTCA GCCAGTTCTC CCAAAACTAT CCACTGCCCT AA
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Protein sequence | MYHLNDLQLA LRIAALESLS AASKEIGMTP AAASAALQRL EKKLGCQLFA RSTRRLQLTE EGRIFLDSAK PALAILETAS ANLAEHRGEL KGEVRLALPS DIGRSQIRAW LDELMDTAPE LTVQLYFGDH MTDLIDQNIH LALRYGQLDD SNLKRRQLAM TPRVLVASPT YLAQHGTPST LNELSQHAVL ILNRGGEPWQ KWKLSHNGAP VEIEVRGQRF CNDGAVIRDW ALSGRGIAYK SWLDVAQDVT EGRLNLVLAD KIAPPIPLQL VYLQTDYPSH KIRRTIEFLV EKLSQFSQNY PLP
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