| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0440 |
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| Symbol | |
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| ID | 5370720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 499648 |
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| End bp | 500355 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828645 |
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| Product | C factor cell-cell signaling protein |
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| Protein accession | YP_001364671 |
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| Protein GI | 152998990 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TTATCGTCGG TGGGAGTGGG GGTATTGGCC AAGCTATGGT TAAGCAAGTC
CAAGAGACAT ATCCCGACGC CACAGTGCAC GCCACCTACA GGCATCATCT TCCACAAGAC
AGGCAGAATA ATATCCAATG GCATGCGCTA GATGTGACCA ATGAGGCCGA GATTAAACAG
CTGAGTGAAC AACTCACTGA ATTAGATTGG CTGATTAACT GTGTCGGGAT TTTGCACACC
CAAGATAAAG GGCCAGAGAA AAGCCTACAA TCTCTGGATA TCGCCTTTTT CCAGCACAAT
TTAACGCTCA ACACCCTGCC CAGCGTCATG CTGGCGAAGC ACTTCTGCCA TGCCTTAAAA
CAAAGTGACT CGGCAAGATT TGCCGTGATA TCGGCAAAAG TCGGCAGCAT TACCGATAAC
AGATTAGGTG GCTGGTACAG CTATCGCGCC TCAAAAGCTG CGCTGAATAT GTTTCTCAAA
ACACTGTCGA TTGAGTGGCA ACGAACCATG AAACACTGCG TGGTGTTATC CCTGCATCCG
GGCACCACTG ATACGCCATT GTCTCAACCC TTTCAACAGA GTGTGCCTAA AGGCAAACTG
TTTACACCTG AGTATGTAGC CAACTGCTTA CTGCCGATCA TTGCCAATGC CACTCCGGTA
CAAACAGGGT GCTTTTTCGC CTACGATGGC ACTGAGTTAC CTTGGTGA
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| Protein sequence | MKVLIVGGSG GIGQAMVKQV QETYPDATVH ATYRHHLPQD RQNNIQWHAL DVTNEAEIKQ
LSEQLTELDW LINCVGILHT QDKGPEKSLQ SLDIAFFQHN LTLNTLPSVM LAKHFCHALK
QSDSARFAVI SAKVGSITDN RLGGWYSYRA SKAALNMFLK TLSIEWQRTM KHCVVLSLHP
GTTDTPLSQP FQQSVPKGKL FTPEYVANCL LPIIANATPV QTGCFFAYDG TELPW
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