Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0439 |
Symbol | |
ID | 5370719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 496699 |
End bp | 499035 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828644 |
Product | peptidase M4 thermolysin |
Protein accession | YP_001364670 |
Protein GI | 152998989 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3227] Zinc metalloprotease (elastase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTAA ACAAAAAACT GTCGCTACTC TTCATTGCTG TGTCGGCCAC GTTAGGCACA TCAGCATTTG CTGCTGATGT TGTCGATGTC GGCACACTCA GAAGCGCGTC TTCAAGCAAT AACTTAGTGT CTCAGTTCAA CTTAGACGCA GGTAGCCAAC TCAAAGTCGA GAAAAAACTC GACCTAGGTC AAGGCAAGCA AAAGCAACGT TTACAACAAT ATTTCCATGA CGTGCCTGTT TATGGTTTCT CTGTTGCAAC GTCACAATCG AGCATGGGCT TCTACAGCGA CATGTCTGGC CGCGTATTAA AAAATATTGA AAAGTCGGCT GATTTTGTCA AACCCACTTT AACGGCTAAC AAAGCGTTAG ACATTGCCAT TCGTGGCAAG TCTGAGAAAG CTGTTGCAGG CCTAAAAGCT GAAAACAAAC AAGCTAAATT ATGGCTTTAC CTGGATGATG CGGCTAAAAC TCGCCTCGTT TATGTGACGT CTTTTGTGGT ATATGGCGAT GAGCCAAGCC GTCCATTCAC TATGATTGAC GCACACTCAG GTGAAGTGCT CAAGCGTTGG GAAGGGATTA ACCACGCCGC TAGCGGTACA GGTCCTGGCG GTAACATCAA GACTGGCCAA TACGAATACG GTACGGATTT TTCTTACTTA GACGTTGAAG TGAGTGGTGA CACCTGCACC ATGAACTCAC CTAACGTGAA AACCGTTAAC TTAAACGGTG CCACATCAGG CGCAACAGCC TTCTCTTATA CTTGCCCACG CAATACCGTT AAAGAGATCA ACGGTGCTTA CTCGCCATTA AACGATGCGC ACTATTTTGG TAACGTGATC TACAACATGT ATAGCGAGTG GTACAACACT GCGCCGTTAA CTTTCCAGTT AACCATGCGG GTTCACTACA GCAGCAACTA TGAAAACGCC TTCTGGGACG GCAGTGCTAT GACCTTCGGT GATGGCGCAA CGACCTTCTA TCCATTAGTG AGCTTAGATG TCTCGGCACA CGAAGTGAGC CATGGTTTCA CTGAGCAAAA CTCAGGCCTG ATTTACGATG CTCAATCTGG TGGCATGAAC GAAGCCTTCT CTGATATGGC GGGTGAAGCT GCTGAATTTT ACATGCATGG CACGAACGAC TGGTTAGTCG GTGCAGATAT CTTTAAAGGC AATGGCGCAC TGCGTTACAT GGCAGATCCA ACCTTAGACG GTATCTCAAT CGGCCATATC GACGATTACT ATGATGGTAT CGACGTACAC CACAGTTCAG GTGTCTTCAA CAAAGCCTTC TACACACTCG CAAACTTACC GGGCTGGGAT ACACGCACTG CATTCCAAAC ATTTGTGGTT GCTAACCAAT TATATTGGAC GGCTGACAGC TTGTTCTGGC AAGGCGCTTG TGGCGTTAAA TCTGCAGCGA CTGACTTAGG CTTAAGTGCT GACGATGTGG TTACTGCGTT TGCCGCTGTG GGTATCACAC CTTGTGAAAC GCCACCACCA CCGCCACCAC CAGAAGCTAC TGAACTCGCG AACGGTGTCG CTGTGACGGG TTTAGCGGGC GCATCTGGTA GCAAACAATA CTACAAACTC GACGTAGCGA GCGGTGCAAC CAACCTGAGC TTTAATATGT CAGGCGGCAC GGGTGATGCG GACATGTATG TTAAATTCGG CCAAGCTCCT ACCTCTAGTA GCTATGATTG CCGTCCATAC AAAGCCGGTA ATGCCGAAAG CTGCCCTATC GATCCAGCCC AAACAGGAAC TTATTGGGTC ATGGTCAGTG GCTATAGCAG CTACACAGGT GTGAGCCTAG TGGGTGCTTA TGACGGTGGC GATGAGATAC CAAACCAAGA TCCAACAGCG GGCTTTACTG CAAGCTTTGC CAACGGTAAC GGTAGCTTCA CTAGCACCAG TACTGACAGC GACGGTGATG TCGTTGCATG GAGCTGGAGC TTCGGTGATG GCACAACTGC TTCAGGCGCA AGTGTAAATC ATCAGTATGC TCAGTCAGGC AACTACACAG TGACATTGAC TGTGACTGAC AACGATGGCG CAACAGCAAG CACTTCTGAA GAATTTGCAG TTGAAGTACC AGAAGTGGCG TTAGAAATGA CAGTGAAAAA CGCTAACAAA TCTCGTCGCG GCAGCATTCG TGTTGCACTC GCATGGGAAG GTCATAACGC TGATGAGTAC ACTATCTTCC GTAACGGCGT TGCGGTAGGT ACTTCAAGCA GTTCATCGTT TATTGACCGT TTCACCGACC TAGCTGGCAC TAGCTTCAGC TATAAAGTGT GTGAAACTAA CGGCCCTTGC TCAAACGAAG AAACCGTTAA CTTTTAA
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Protein sequence | MMLNKKLSLL FIAVSATLGT SAFAADVVDV GTLRSASSSN NLVSQFNLDA GSQLKVEKKL DLGQGKQKQR LQQYFHDVPV YGFSVATSQS SMGFYSDMSG RVLKNIEKSA DFVKPTLTAN KALDIAIRGK SEKAVAGLKA ENKQAKLWLY LDDAAKTRLV YVTSFVVYGD EPSRPFTMID AHSGEVLKRW EGINHAASGT GPGGNIKTGQ YEYGTDFSYL DVEVSGDTCT MNSPNVKTVN LNGATSGATA FSYTCPRNTV KEINGAYSPL NDAHYFGNVI YNMYSEWYNT APLTFQLTMR VHYSSNYENA FWDGSAMTFG DGATTFYPLV SLDVSAHEVS HGFTEQNSGL IYDAQSGGMN EAFSDMAGEA AEFYMHGTND WLVGADIFKG NGALRYMADP TLDGISIGHI DDYYDGIDVH HSSGVFNKAF YTLANLPGWD TRTAFQTFVV ANQLYWTADS LFWQGACGVK SAATDLGLSA DDVVTAFAAV GITPCETPPP PPPPEATELA NGVAVTGLAG ASGSKQYYKL DVASGATNLS FNMSGGTGDA DMYVKFGQAP TSSSYDCRPY KAGNAESCPI DPAQTGTYWV MVSGYSSYTG VSLVGAYDGG DEIPNQDPTA GFTASFANGN GSFTSTSTDS DGDVVAWSWS FGDGTTASGA SVNHQYAQSG NYTVTLTVTD NDGATASTSE EFAVEVPEVA LEMTVKNANK SRRGSIRVAL AWEGHNADEY TIFRNGVAVG TSSSSSFIDR FTDLAGTSFS YKVCETNGPC SNEETVNF
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