Gene Shew185_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0439 
Symbol 
ID5370719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp496699 
End bp499035 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content48% 
IMG OID640828644 
Productpeptidase M4 thermolysin 
Protein accessionYP_001364670 
Protein GI152998989 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTAA ACAAAAAACT GTCGCTACTC TTCATTGCTG TGTCGGCCAC GTTAGGCACA 
TCAGCATTTG CTGCTGATGT TGTCGATGTC GGCACACTCA GAAGCGCGTC TTCAAGCAAT
AACTTAGTGT CTCAGTTCAA CTTAGACGCA GGTAGCCAAC TCAAAGTCGA GAAAAAACTC
GACCTAGGTC AAGGCAAGCA AAAGCAACGT TTACAACAAT ATTTCCATGA CGTGCCTGTT
TATGGTTTCT CTGTTGCAAC GTCACAATCG AGCATGGGCT TCTACAGCGA CATGTCTGGC
CGCGTATTAA AAAATATTGA AAAGTCGGCT GATTTTGTCA AACCCACTTT AACGGCTAAC
AAAGCGTTAG ACATTGCCAT TCGTGGCAAG TCTGAGAAAG CTGTTGCAGG CCTAAAAGCT
GAAAACAAAC AAGCTAAATT ATGGCTTTAC CTGGATGATG CGGCTAAAAC TCGCCTCGTT
TATGTGACGT CTTTTGTGGT ATATGGCGAT GAGCCAAGCC GTCCATTCAC TATGATTGAC
GCACACTCAG GTGAAGTGCT CAAGCGTTGG GAAGGGATTA ACCACGCCGC TAGCGGTACA
GGTCCTGGCG GTAACATCAA GACTGGCCAA TACGAATACG GTACGGATTT TTCTTACTTA
GACGTTGAAG TGAGTGGTGA CACCTGCACC ATGAACTCAC CTAACGTGAA AACCGTTAAC
TTAAACGGTG CCACATCAGG CGCAACAGCC TTCTCTTATA CTTGCCCACG CAATACCGTT
AAAGAGATCA ACGGTGCTTA CTCGCCATTA AACGATGCGC ACTATTTTGG TAACGTGATC
TACAACATGT ATAGCGAGTG GTACAACACT GCGCCGTTAA CTTTCCAGTT AACCATGCGG
GTTCACTACA GCAGCAACTA TGAAAACGCC TTCTGGGACG GCAGTGCTAT GACCTTCGGT
GATGGCGCAA CGACCTTCTA TCCATTAGTG AGCTTAGATG TCTCGGCACA CGAAGTGAGC
CATGGTTTCA CTGAGCAAAA CTCAGGCCTG ATTTACGATG CTCAATCTGG TGGCATGAAC
GAAGCCTTCT CTGATATGGC GGGTGAAGCT GCTGAATTTT ACATGCATGG CACGAACGAC
TGGTTAGTCG GTGCAGATAT CTTTAAAGGC AATGGCGCAC TGCGTTACAT GGCAGATCCA
ACCTTAGACG GTATCTCAAT CGGCCATATC GACGATTACT ATGATGGTAT CGACGTACAC
CACAGTTCAG GTGTCTTCAA CAAAGCCTTC TACACACTCG CAAACTTACC GGGCTGGGAT
ACACGCACTG CATTCCAAAC ATTTGTGGTT GCTAACCAAT TATATTGGAC GGCTGACAGC
TTGTTCTGGC AAGGCGCTTG TGGCGTTAAA TCTGCAGCGA CTGACTTAGG CTTAAGTGCT
GACGATGTGG TTACTGCGTT TGCCGCTGTG GGTATCACAC CTTGTGAAAC GCCACCACCA
CCGCCACCAC CAGAAGCTAC TGAACTCGCG AACGGTGTCG CTGTGACGGG TTTAGCGGGC
GCATCTGGTA GCAAACAATA CTACAAACTC GACGTAGCGA GCGGTGCAAC CAACCTGAGC
TTTAATATGT CAGGCGGCAC GGGTGATGCG GACATGTATG TTAAATTCGG CCAAGCTCCT
ACCTCTAGTA GCTATGATTG CCGTCCATAC AAAGCCGGTA ATGCCGAAAG CTGCCCTATC
GATCCAGCCC AAACAGGAAC TTATTGGGTC ATGGTCAGTG GCTATAGCAG CTACACAGGT
GTGAGCCTAG TGGGTGCTTA TGACGGTGGC GATGAGATAC CAAACCAAGA TCCAACAGCG
GGCTTTACTG CAAGCTTTGC CAACGGTAAC GGTAGCTTCA CTAGCACCAG TACTGACAGC
GACGGTGATG TCGTTGCATG GAGCTGGAGC TTCGGTGATG GCACAACTGC TTCAGGCGCA
AGTGTAAATC ATCAGTATGC TCAGTCAGGC AACTACACAG TGACATTGAC TGTGACTGAC
AACGATGGCG CAACAGCAAG CACTTCTGAA GAATTTGCAG TTGAAGTACC AGAAGTGGCG
TTAGAAATGA CAGTGAAAAA CGCTAACAAA TCTCGTCGCG GCAGCATTCG TGTTGCACTC
GCATGGGAAG GTCATAACGC TGATGAGTAC ACTATCTTCC GTAACGGCGT TGCGGTAGGT
ACTTCAAGCA GTTCATCGTT TATTGACCGT TTCACCGACC TAGCTGGCAC TAGCTTCAGC
TATAAAGTGT GTGAAACTAA CGGCCCTTGC TCAAACGAAG AAACCGTTAA CTTTTAA
 
Protein sequence
MMLNKKLSLL FIAVSATLGT SAFAADVVDV GTLRSASSSN NLVSQFNLDA GSQLKVEKKL 
DLGQGKQKQR LQQYFHDVPV YGFSVATSQS SMGFYSDMSG RVLKNIEKSA DFVKPTLTAN
KALDIAIRGK SEKAVAGLKA ENKQAKLWLY LDDAAKTRLV YVTSFVVYGD EPSRPFTMID
AHSGEVLKRW EGINHAASGT GPGGNIKTGQ YEYGTDFSYL DVEVSGDTCT MNSPNVKTVN
LNGATSGATA FSYTCPRNTV KEINGAYSPL NDAHYFGNVI YNMYSEWYNT APLTFQLTMR
VHYSSNYENA FWDGSAMTFG DGATTFYPLV SLDVSAHEVS HGFTEQNSGL IYDAQSGGMN
EAFSDMAGEA AEFYMHGTND WLVGADIFKG NGALRYMADP TLDGISIGHI DDYYDGIDVH
HSSGVFNKAF YTLANLPGWD TRTAFQTFVV ANQLYWTADS LFWQGACGVK SAATDLGLSA
DDVVTAFAAV GITPCETPPP PPPPEATELA NGVAVTGLAG ASGSKQYYKL DVASGATNLS
FNMSGGTGDA DMYVKFGQAP TSSSYDCRPY KAGNAESCPI DPAQTGTYWV MVSGYSSYTG
VSLVGAYDGG DEIPNQDPTA GFTASFANGN GSFTSTSTDS DGDVVAWSWS FGDGTTASGA
SVNHQYAQSG NYTVTLTVTD NDGATASTSE EFAVEVPEVA LEMTVKNANK SRRGSIRVAL
AWEGHNADEY TIFRNGVAVG TSSSSSFIDR FTDLAGTSFS YKVCETNGPC SNEETVNF