| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0414 |
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| Symbol | |
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| ID | 5373674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 471893 |
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| End bp | 472648 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828620 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001364646 |
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| Protein GI | 152998965 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAC AGCAGCCACT TATCAGCCAT TTGCTTGAAC TTAGGTCCAA GCTGCTAAAA
TCCATTGCCA GCGTGTTATT AGTGTTCATT TGCAGCGTGT ACTGGGCAAA TGATATCTAC
CATTACATGG CAATACCTTT AATGCAGTCT TTACCCCTTG GTGGCAGCAT GATTGCGACC
GATGTCGCTG CCCCTTTCTT CGCGCCTTTT AAATTGACCC TAGTATTATC GTTTTTTGTG
GCTGTGCCCT ATGTGTTGTT CCAGATCTGG TCCTTTGTCG CACCGGGTTT ATACAAACAT
GAAAAACGTT TAGTGATGCC ACTGCTATTT AGCAGTACCT TATTGTTTTA TCTCGGTATC
GCCTTCGCTT ATTACATAGT ATTCCCCGTC GTTTTTGGCT TCTTTGCTAA CAATGCCCCA
GAGGGCGTTC AAGTTGCGAC CGACATTACC AGTTACCTTA ACTTCATTCT GAAGCTGTTC
TTTGCCTTTG GTCTATCCTT TGAAATCCCT ATAGCCGTTG TTTTACTTTG CTGGGCGGGT
GTGACAACAC CTGAAGAACT TAAGCAAAAA CGTCCTTATA TCGTCGTAGG CGCCTTCGTT
GTGGGCATGC TGTTAACCCC ACCCGATGTA ATTTCCCAGA CTATGCTTGC CGTACCAATG
CTGTTATTGT TCGAAGGCGG TTTATTAGCG GCTCGTTTCT ACAGCAAGCA AGGTGACGAC
GAGTCAGACG AAGATAGCGA ACAAACAAAC GACTAA
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| Protein sequence | MSQQQPLISH LLELRSKLLK SIASVLLVFI CSVYWANDIY HYMAIPLMQS LPLGGSMIAT
DVAAPFFAPF KLTLVLSFFV AVPYVLFQIW SFVAPGLYKH EKRLVMPLLF SSTLLFYLGI
AFAYYIVFPV VFGFFANNAP EGVQVATDIT SYLNFILKLF FAFGLSFEIP IAVVLLCWAG
VTTPEELKQK RPYIVVGAFV VGMLLTPPDV ISQTMLAVPM LLLFEGGLLA ARFYSKQGDD
ESDEDSEQTN D
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