| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0407 |
|---|
| Symbol | |
|---|
| ID | 5371924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 456775 |
|---|
| End bp | 457221 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640828606 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001364639 |
|---|
| Protein GI | 152998958 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4701] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000171569 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC CCCCTCAAGA TCTCAGCCAA TTACTGCATC AATCGGGCAA ATTACCCGAC
CTTGCTGAGA AAGCGGAACT ACTTATGTAT CTGAATCATC ATGTGAAGCA GATTATCGCA
GGTCCTGTTG CGGAGCAGCT AAAAGTCGCT AATTTCCGCC AGGGTGTTCT TGTGGTTGAA
ACCACTTCGG CGGCCTGGGC TGCACGAATT AATTTCCAAA AGCCGAAGCT ACTAGCGCAG
CTTCAAGCAG AAACGCTCCC AATCCTTACC GCAATCGAAG TTAAAGTCAA CCCGAGATTA
GCAATGTATG ACGCAAAGCC TAAACAGGGA CACAAAGAAT TAAGCCCTGC GGCAGCGGAG
CATATTGCGG CATTAGCGGA AAATATTGGC GGTTCACTGG GCGAAAAACT AAAACGGCTG
GCCTCATTGG CCAGCCGTAA TAAATAA
|
|---|
| Protein sequence | MKKPPQDLSQ LLHQSGKLPD LAEKAELLMY LNHHVKQIIA GPVAEQLKVA NFRQGVLVVE
TTSAAWAARI NFQKPKLLAQ LQAETLPILT AIEVKVNPRL AMYDAKPKQG HKELSPAAAE
HIAALAENIG GSLGEKLKRL ASLASRNK
|
|---|
| |