| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0396 |
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| Symbol | murE |
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| ID | 5371509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 443278 |
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| End bp | 444777 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640828595 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001364628 |
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| Protein GI | 152998947 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTAT TACGGGATCT GCTCGCGCCT TGGCTGCATT ATGCCGGCGC GCAGTCCTTC
AACGATTTGA CCTTAGATAG CCGCGCAATA CGTCGCGGCG ATGTGTTTTT GGCGCTGCCA
GGACATAAGG TTGATGGCAG ACAGTTTATT GAAAAAGCCT TAGATTTAGG TGCCGCAGCC
GTATTAGTCC ACACGGATGA TGCTGATCAG CATGGCAAAG TGTTGCACAG CGATAATGTC
GAGCACGGCG TACAGATTTA TGTCTTCCAG TTGAGTCGCC AAGTATCGGC CATCGCCGCC
CAGCGTTATC CCTTAGCGCA TCAGTCTGCG ACAACATCCC TTGGGGTGAT TGGTATTACT
GGCACCAATG GTAAAACCTC GACAAGCCAA CTGATTGCCC AGCTGATAAC GTCGCTCGGC
CGCAAAGCCG CTGTGATGGG CACCCTTGGC AATGGTCTCT GGGGCGAGCT TGTCGATAGC
GGCAATACCA CAACCGATGC TATTACCCTA ATGCGTCAGT TGCATGACTT TGAAGCTCAA
GGCGCGAGTG TCTGCGCCAT GGAAGTGTCG AGCCACGGCT TAGTGCAAGG CCGCGTCGAT
GCAGTACCAT TCGATGTTGC CGTATTTACC AATCTGACGC GCGATCACCT CGATTACCAC
GGCGACATGG AAAGCTATGC CGCCGCTAAG CAAAGCCTAT TTCGTTTCAG CACCTTAGGT
CACGGTTTAT TGAATCTTGA CGACGCGGTT GGTGCATCTT GGTTGACTGA ACTTAAATCT
GTGCCCGCGC AAATGTGGGG CTTTAGTATT GAAGGTCATC AAGCCGCGGC TTTTTATACT
AAAAATGCCA AGTTTGACGA TCAAGGTGTC AGTGCAACCT TAGTCTGGCC CGAGGGCGAG
ACTCAAATCC ACTCACCACT TCTTGGTGCC TTTAATCTCT CTAATTTACT CGCGGCGCTA
TCGGCCTTGT ATCTGCAAGG TTTTGATATG AAAGCGTTAG CCGAGCAAGT GCAATACTTA
ACGCCCGTCG CAGGTCGTAT GGAGCGTTTC ACAACTGCGA ATAACATCAC CTTAGTGGTC
GATTATGCCC ATACGCCAGA TGCGATTGAA CAAGCGTTAA ACGCGCTACG TCGCCATTGT
GCTGGTGATT TATGGTGCGT ATTTGGCTGT GGTGGCGACC GTGATAAGGG CAAGCGTCCT
TTGATGGGCA AAGCTGCAGA ACAGTATGCT GACCGCATTA TGGTGACGAG CGACAATGCG
CGCAGTGAAG ACCCCGCGCA AATTATTACC GATATTATCC AAGGGCTAAC CCTCTCTCAG
CAGGCATTGA CTCAGGTTGA CCGTATCGCA GCAATTAAAG AGGTTGTGGC ATTGGCGAAA
CCTGGCGATG TGATCTTGCT GGCGGGCAAA GGCCACGAAA CTTACCAAGA GGCGGCAGGT
GTGCGTCATG ACTATGATGA ACGCGCCCTG GCACGCCAGT TATCGGAGCA ATCAAGATGA
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| Protein sequence | MMLLRDLLAP WLHYAGAQSF NDLTLDSRAI RRGDVFLALP GHKVDGRQFI EKALDLGAAA
VLVHTDDADQ HGKVLHSDNV EHGVQIYVFQ LSRQVSAIAA QRYPLAHQSA TTSLGVIGIT
GTNGKTSTSQ LIAQLITSLG RKAAVMGTLG NGLWGELVDS GNTTTDAITL MRQLHDFEAQ
GASVCAMEVS SHGLVQGRVD AVPFDVAVFT NLTRDHLDYH GDMESYAAAK QSLFRFSTLG
HGLLNLDDAV GASWLTELKS VPAQMWGFSI EGHQAAAFYT KNAKFDDQGV SATLVWPEGE
TQIHSPLLGA FNLSNLLAAL SALYLQGFDM KALAEQVQYL TPVAGRMERF TTANNITLVV
DYAHTPDAIE QALNALRRHC AGDLWCVFGC GGDRDKGKRP LMGKAAEQYA DRIMVTSDNA
RSEDPAQIIT DIIQGLTLSQ QALTQVDRIA AIKEVVALAK PGDVILLAGK GHETYQEAAG
VRHDYDERAL ARQLSEQSR
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