Gene Shew185_0383 details

Gene Information

• Locus tag: Shew185_0383
• ID: 5371188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 426117
• End bp: 427940
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640828582
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001364615
• Protein GI: 152998934
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGC TCGTACTCGA CACGCATGAT GATCCGCTCT CGCAACGCCT CGCACAGGTG 
TTTGGTTACC GTGACTTTAG GGACGGTCAG CGGGAGGTGA TAGAACGTGT CTGCGGCGGG 
CAAGATTGCT TAGTGATCAT GCCAACTGGC GGCGGTAAGA GTCTTTGCTA TCAACTCCCC 
GCATTGCTGA TGGATGGCAT TACTATTGTC GTATCTCCAT TGATTTCTTT GATGAAAGAT 
CAAGTCGATA GCTTGTTACA AACCGGTGTT GCAGCGGCTT ATCTCAATTC TTCATTGCCG 
CGAGAGCAGA GCGCCGAAGT ATTAAGGCAG CTGCGCCACG GTGAGTTAAA ACTACTTTAT 
GTGTCACCAG AGCGCTTATT AAGCGCAGAT TTTATTGAGC GAATGCAGTC GTTGCAGCTA 
GCGATGTTTG CCATCGATGA GGCGCATTGT ATCAGTCAAT GGGGTCATGA TTTTCGCCCT 
GAATATGCGG CGCTCGGCCA GTTAAAGCAA CTCTTCCCCT ATGTGCCCAT GATGGCGCTG 
ACAGCAACAG CAGATCAGGC GACTCGACAG AGTATTTGCG AGCGACTTGG GATTGACCCT 
TTCCGTTTAC TCTCGAGTTT CGATAGGCCT AATATTCGCT ACACAGTCGC CGAAAAGCTC 
AATGCTGCGA ATCAGTTACG GCATTTTCTA ACCCAGCAAA ATGGCACCAA CGGGATTATT 
TACTGTAGCA GTCGACGCCG TGTCGACGAG GTTGCCGATC GTTTATGTCT ACAAGGTTTT 
AATGCTAAGG CCTATCATGC GGGAATGACG CAGGAAGATC GTAGCGCAGT GCAGGACAGT 
TTCCTTAAGG ATCAAATCGA TATCGTGGTC GCCACTGTGG CTTTCGGTAT GGGGATCAAT 
AAGTCGAATG TGCGCTTTGT GGTGCATTAC GATATTCCGA AAAGTATCGA GGCTTACTAC 
CAGGAAACGG GCCGTGCCGG CCGCGATGGG CTTGATGCTG AGGCCTTTAT GCTGTTTGAT 
CCTGCCGATA TTGGCCGGGT GCGACATTTG ATTGAACAGT CTGAGCCCGG GCCGCAGCAG 
CAAGTCGAAT TCCATAAACT CAATACCATG GCGGCGTTTG CTGAGGCGCA AACCTGCCGT 
CGCCAAGTGC TATTGCATTA CTTTGATGAG AGCGCACTAG AGCCCTGTGG TAACTGCGAT 
ATTTGCCTCG ATCCACCTAA GCGTTATAAC GGTACCGAAG ATGCACAAAA GGTGTTGTCA 
TGTATTTTCC GTTTAGGGCA GCGTTTTGGT ATTAATCACT TAATTGAAGT GTTGCGCGGC 
TCGAAAGGCG CCCCGATTGT TGACCGAGGC CATGACAAAC TCACGACTTG GGGGATTGGT 
AAAGACAAGA GCCATGAGTA TTGGTTGAGC GTGATCCGTC AATTGATCCA CTTGGGACTG 
GCGAGTCAAG ATGTGACGCG AGGTTCATCT ATAACCTTAA ACCCATCGGC ACGACCTGTA 
CTCAAAGGTG AGGTGGCATT AATGCTCGCC GAACCGCGTA TTCAGTTAAC GACCACAAAA 
CGTAAGGTGA GCCAGTCCAA GGCGCCGCTG AACTACGATC GTAAGCTATT CGCGCGACTC 
AAGTTACTGC GAAGAACCAT AGCTGAGCAG CAAGATGTGC CGCCGTATTT AGTGTTTAAC 
GATGCGACGC TGGCGGAAAT GGCGGCCATG ATGCCGACCA GTGCAGGAGA AATGCTCGCC 
GTTAACGGAG TGGGCGAGCG TAAACTGAGT CGTTTCGGCG ACGCTTTTCT CGATGAAATC 
GCGGCTTATT TAGCGGGAGA ATAA 

 

Protein sequence

MEKLVLDTHD DPLSQRLAQV FGYRDFRDGQ REVIERVCGG QDCLVIMPTG GGKSLCYQLP 
ALLMDGITIV VSPLISLMKD QVDSLLQTGV AAAYLNSSLP REQSAEVLRQ LRHGELKLLY 
VSPERLLSAD FIERMQSLQL AMFAIDEAHC ISQWGHDFRP EYAALGQLKQ LFPYVPMMAL 
TATADQATRQ SICERLGIDP FRLLSSFDRP NIRYTVAEKL NAANQLRHFL TQQNGTNGII 
YCSSRRRVDE VADRLCLQGF NAKAYHAGMT QEDRSAVQDS FLKDQIDIVV ATVAFGMGIN 
KSNVRFVVHY DIPKSIEAYY QETGRAGRDG LDAEAFMLFD PADIGRVRHL IEQSEPGPQQ 
QVEFHKLNTM AAFAEAQTCR RQVLLHYFDE SALEPCGNCD ICLDPPKRYN GTEDAQKVLS 
CIFRLGQRFG INHLIEVLRG SKGAPIVDRG HDKLTTWGIG KDKSHEYWLS VIRQLIHLGL 
ASQDVTRGSS ITLNPSARPV LKGEVALMLA EPRIQLTTTK RKVSQSKAPL NYDRKLFARL 
KLLRRTIAEQ QDVPPYLVFN DATLAEMAAM MPTSAGEMLA VNGVGERKLS RFGDAFLDEI 
AAYLAGE