| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0347 |
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| Symbol | |
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| ID | 5372246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 388423 |
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| End bp | 389127 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828547 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001364580 |
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| Protein GI | 152998899 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0393217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TATTAATCGT CTCAAGCTTA GCGCTTATCA GCAGCCACGC GTTTGCAGCG
TCGCCCTCTA ATGCCAATAT CACCAGCATA GATGCGGCCT CAAACTCGAT GAACCTAGCG
CAGTTGCAAC AACTGAGTGC CAGCACCCAA GATTACGACA AAGCCTATGC GAACTATCGC
TTAGCCATTA GCGCCAATGT CATGGGACAG AAAGCCCTCG CCAGCAGTGC ACTGACTAAT
GCGCAAACTG CATTAGAAGC CTTAGAAACC AACCAAGCTG ACGCGGAATC CCTAGCGCTG
TTATCGTCGG TTTATGGCAT GCAAATCGCC TTAGACAATA GCAAAGGCGC AACGCTCGGC
ATGAAATCAG CCAAAGCCAT TGCCAACGCC GAGCAGTTAG AACCCCAAAA TCCACGGGTC
GCGTTGGTTA AAGCGATCGC CGCCTATAAC ACGCCTGCTA TGTTTGGCGG CAGCATGCAA
AATGCTAAGA CGCTCGCCAC TACCGCCATA GAAAGATTCG CCCAACCTTG CGACGACATT
TGTTGGGGTG AAGCCGAAGC TTATACGTGG CGCGGGCTCG CTAAACAGGA ATTAGGCGAT
AACCAAGGCG CGATCGAAGA TTGGCAACAG GCGATGAAAG TGCAAGCAGA TTACGGTTGG
GCAAAATTTT TGCTTCAACA AAATCAGCAA TTAAGTGCAA ACTAG
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| Protein sequence | MKTLLIVSSL ALISSHAFAA SPSNANITSI DAASNSMNLA QLQQLSASTQ DYDKAYANYR
LAISANVMGQ KALASSALTN AQTALEALET NQADAESLAL LSSVYGMQIA LDNSKGATLG
MKSAKAIANA EQLEPQNPRV ALVKAIAAYN TPAMFGGSMQ NAKTLATTAI ERFAQPCDDI
CWGEAEAYTW RGLAKQELGD NQGAIEDWQQ AMKVQADYGW AKFLLQQNQQ LSAN
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