| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0334 |
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| Symbol | |
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| ID | 5372370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 375079 |
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| End bp | 376653 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640828534 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001364567 |
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| Protein GI | 152998886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACA CCAAAGCAGC CGACTCCGAG AGTCAATCAG ACCTACAGAC TGTTGAGTTC
GGCCGTCAAT ATCTCACCTT AGAACAAGTG GTTGCCGTCG CCAAGGGCGC ACCAGTCAAG
CTCTGTGACG ATGCGGATTA TCAAGAATAT ATCCAAAAAG GTGCGCGCTT TATCGATAGC
CTGCTGCACG AAGAAGGCGT GGTCTATGGG GTAACCACAG GTTATGGCGA CTCTTGCACT
GTCAATGTGA GCTTAGATCT GGTCCACGAG TTACCACTGC ATTTAACCCG CTTCCACGGC
TGCGGTTTAG GCGAGACCTT AAGCATAATG CAGGCCCGCG CTGTGATGGC TTGCCGTTTA
AACTCCTTAG CCATTGGCAA ATCTGGCGTG ACCTATGAGC TATTAAAGCG CATCGAAACC
TTGCTCAATC TCAACATAGT GCCAGTCATC CCAGAGGAAG GTTCGGTCGG CGCCAGCGGG
GATTTAACGC CGTTGTCGTA TTTAGCCGCC GTGTTAGTCG GTGAGCGCGA AGTGATTTAC
CAAGGTGAGC GCCAAGCGAC TCAAGATGTG TACGCTAAGC TCAACATCAC TCCGCACGTA
CTGCGTCCAA AAGAAGGCTT AGCCCTGATG AACGGCACGG CTGTGATGAC AGCTTTAGCC
TGCTTAGCCT TTGATCGCGC GCAATATCTT GCTCGCTTGA GTAGTCGCAT TACCGCCATG
GCCTCGTTAA CGCTAAAAGG CAACTCGAAC CATTTTGATG AAATCTTATT TGCCGCCAAA
CCGCATCTAG GGCAAAACCA AATCGCCACT TGGATCCGTG AAGATTTGAA TCACCACGAA
CATCCACGTA ATTCTGATCG TCTGCAGGAC AGATATTCTA TCCGCTGCGC ACCGCACATT
ATCGGCGTGT TGCAGGATGC GCTGCCGTTT ATGCGTCAGT TTATCGAAAC CGAAGTCAAC
AGCGCCAACG ACAACCCGAT TGTCGACGGC GAAGGCGAGC ATATTCTCCA CGGTGGCCAT
TTCTACGGCG GCCATATCGC CTTTGCGATG GATTCACTGA AGAATACTGT GGCCAACTTA
GCCGATCTTA TCGACCGCCA AATGGCGCTA GTGATGGACC CTAAGTTTAA CAATGGCTTA
CCTGCCAACT TATCCGGCTC AACCGGTCCG CGCCGCGCGA TTAATCATGG TTTTAAAGCG
GTGCAAATTG GCGTGTCGGC TTGGACGGCA GAAGCGCTCA AACACACTAT GCCCGCCAGC
GTGTTCTCAC GCTCAACCGA ATGCCACAAT CAAGACAAAG TCAGCATGGG CACTATCGCC
GCCCGCGACT GTATGCGCGT GCTGCAATTG ACCGAACAAG TCGCAGCGGC TGCATTACTT
GCCATGACCC AAGGTATTGG CCTGCGTATC GCACAGAATG AACTGAGCGA AGCCTCGCTC
ACACCCTCAT TGGCGAAAAC CCTCGCTCAA GTGCGCGCCG ATTTTGAAAC CTTAATTGAA
GATAGGCCGC TCGAAGCCGT TCTGCGCCAA ACCATAGCTA AAATCCAAGC GGGCGAATGG
GAAGTGTGCC GATGA
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| Protein sequence | MSHTKAADSE SQSDLQTVEF GRQYLTLEQV VAVAKGAPVK LCDDADYQEY IQKGARFIDS
LLHEEGVVYG VTTGYGDSCT VNVSLDLVHE LPLHLTRFHG CGLGETLSIM QARAVMACRL
NSLAIGKSGV TYELLKRIET LLNLNIVPVI PEEGSVGASG DLTPLSYLAA VLVGEREVIY
QGERQATQDV YAKLNITPHV LRPKEGLALM NGTAVMTALA CLAFDRAQYL ARLSSRITAM
ASLTLKGNSN HFDEILFAAK PHLGQNQIAT WIREDLNHHE HPRNSDRLQD RYSIRCAPHI
IGVLQDALPF MRQFIETEVN SANDNPIVDG EGEHILHGGH FYGGHIAFAM DSLKNTVANL
ADLIDRQMAL VMDPKFNNGL PANLSGSTGP RRAINHGFKA VQIGVSAWTA EALKHTMPAS
VFSRSTECHN QDKVSMGTIA ARDCMRVLQL TEQVAAAALL AMTQGIGLRI AQNELSEASL
TPSLAKTLAQ VRADFETLIE DRPLEAVLRQ TIAKIQAGEW EVCR
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