Gene Shew185_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0317 
Symbol 
ID5373026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp359226 
End bp359663 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID640828517 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001364550 
Protein GI152998869 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0009166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGCGT TAATTCAAAG AGTGAGCCGC GCCAGTGTGG TTGTCGATAA TCAAACCATA 
GGTGCAATCG ATAAGGGCCT GTTGGTTCTG CTGGGCGTCG AGCAGCAGGA TACCCGCGAG 
AAGATGGAAA AACTGGCAAC TAAAGTGATG AGTTATCGCG TGTTTTCCGA TGAAAATGGC 
AAGATGAATC TCAACCTAGA GCAAGTCGGT GGCTCTTTGT TAGTGGTGTC GCAATTTACC 
TTGGCCGCCG ATACGGGCCG TGGCTTGAGA CCGAGTTTTT CTGGCGCCGG TACGCCGGAT 
CAAGCCTTGG CACTCTATGA AGAGTTTGTC GCATTTTGCC GCGCTAAGGG CGTGACCACA 
GAAACCGGAC AATTCGGCGC CGATATGCAA GTGTCCTTAG TCAATGATGG CCCTGTGACG 
TTTAATCTGC AGGTGTAG
 
Protein sequence
MIALIQRVSR ASVVVDNQTI GAIDKGLLVL LGVEQQDTRE KMEKLATKVM SYRVFSDENG 
KMNLNLEQVG GSLLVVSQFT LAADTGRGLR PSFSGAGTPD QALALYEEFV AFCRAKGVTT 
ETGQFGADMQ VSLVNDGPVT FNLQV