| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0310 |
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| Symbol | |
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| ID | 5373349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 352981 |
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| End bp | 354003 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828510 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001364543 |
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| Protein GI | 152998862 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCCA ACCGACAGCA ACTGATCCGT TCGTTATTTG ACGAATACAT TGAGATGTAT
TCCTCCCGTG ATGACAGGCT AACCCACCGC TTTAGTGAGA ACTTTAGCGG CTATGCTGGC
AGTAGTGACC AGCTTGTGAC CGACAGGGAA GAATGGGTGC GGATCACTCG GCAGGACTTT
GCACAAGTGC CTGAGCGGAT CCATATCGAA ATGTTGGATC TCTCCTTACA AGATCTTGCC
GATAACCTCG TGGTTGTGAC TGCCTTTTTC CATATCCACT TACCCATCCC TAATCCTATG
TTTTCCCGCG AAACGGCACG GCTAGTATTG ATATTTCGTT TAGAACACAA AGACTGGATG
ATTGCCCACA GTGGCATATC CATCCCCTAC GGCTTAGCCC ACAAAGGGGA GATTTACCCT
ATAGCCCGAT TAGAAGAGCG TAATGTCGAA CTTGAATCCA TGATCAAGGC ACGAACCTGT
GAGCTGGCAG AAGCCAATAG GCAACTCGAA ATACTCAGCA ATACCGATGG TTTAACCAAT
ATCGGCAACC GCCGCCTATT TGACATGATG TTACAAACGG AGTGGAGCCG AGGACAAAGG
AGCAATTCCT CACTTGCCCT CATCATGCTC GATATTGACC ACTTCAAACA ATTTAACGAT
CACTATGGCC ACCTCGCTGG AGATGATTGC CTTAAACAAC TGGCCAGTAC TTTATCCCAG
TCGGGCCGCA GAGCCGGCGA ACTCGTGGCT CGCTACGGTG GTGAGGAATT TGTCATTCTG
TTGCCCAATA TCGACAAACA AACGGTACTC GACACAGCGC AGCATATTCA TCAGTTGATC
CAAACCATTG CCATTCCACA TGCGAATACC GACCTTGGTA TTGTGACCGT CAGCGCAGGA
GTCGCTTATC TGCAGCCCTC TAACCAACAA AATGCTTTAG AACTCGTTCG CCAAGCCGAT
GCCGCCCTCT ACCGCGCAAA ATCAGCAGGC CGCAATTGCA TACGGGTGAT GAATGAGAAG
TAA
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| Protein sequence | MRPNRQQLIR SLFDEYIEMY SSRDDRLTHR FSENFSGYAG SSDQLVTDRE EWVRITRQDF
AQVPERIHIE MLDLSLQDLA DNLVVVTAFF HIHLPIPNPM FSRETARLVL IFRLEHKDWM
IAHSGISIPY GLAHKGEIYP IARLEERNVE LESMIKARTC ELAEANRQLE ILSNTDGLTN
IGNRRLFDMM LQTEWSRGQR SNSSLALIML DIDHFKQFND HYGHLAGDDC LKQLASTLSQ
SGRRAGELVA RYGGEEFVIL LPNIDKQTVL DTAQHIHQLI QTIAIPHANT DLGIVTVSAG
VAYLQPSNQQ NALELVRQAD AALYRAKSAG RNCIRVMNEK
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