| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0300 |
|---|
| Symbol | |
|---|
| ID | 5373057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 340465 |
|---|
| End bp | 341586 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828501 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_001364534 |
|---|
| Protein GI | 152998853 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAG ACTTTAAAAA GGACTTTTAC CTCGCGGGTC CAGGATATCT ATTGAACCAT
TCCGTCGGTC GACCGTTAAA ATCGACCGAA CAGGTCTTCA AAGAAGCCTT TTTTGCGCCT
TGGCAGGAAT CGGGGCGCGA GCCTTGGGGT CAGTGGCTGA GTGTGATTGA TGATTTTACC
TTTGCCTTAT CTAAACTGTT TAACGGCCAC CAAAAGGACT TTTGTCCTCA GGTGAATCTC
TCCAGTGCAC TGACTAAAAT CGTTATGTCA CTCGACCGAT TAAATCGCGA ACACGCCGTT
GTGTTGATGA GTGAGATTGA TTTCCCCAGC ATGGGTTTCG CCCTTAAAAA AGCGCTGCCA
GCTAGCTGCG AAGTGCGTTT TATTCCTAAG GGACTTGATG TCACTGACCC TAATGTGTGG
GACGCACATA TCAGTCGCGA TGTGGATCTG GTGTTTGTCA GCCATGCTTA CTCGAATACG
GGGCAGCAGG CGCCATTAGC CAATATTTTC ACCATAGCCC GTGAGCGAGG CTGTTTGAGC
TTAGTGGATG TAGCGCAATC GGCGGGGATT ATTCCGCTAG ATCTCGCGCG CCTACAACCT
GATTTTTTAA TCGGGTCGAG TGTGAAATGG CTCTGCGGCG GCCCTGGTGC CGCCTATCTT
TGGGTTAATC CCGCCATATT GGATAGTTGT CAGCCAAAGG ATGTGGGGTG GTTTAGCCAC
GAGAATCCGT TCGAGTTCGA TATCCATGAT TTTCGTTACC AGCATTCCGC AATGCGCTTC
TGGGGTGGAA CGCCTTCAAT CGCCCCCTAT GCCATTGCCG CCCACAGCAT TCATTACCTT
GCAGGTCTAG GCATCCCCTT GCTGCGTAAA TGTAATCAGC AGTTAATTGA TGCCGTGGCG
CAAGAGCTCG AACATGAGTT TGTGTCGCCA CGGGATGTTG AAAAGCGCAG CGGTACGCTG
ATTTTGCAGT TTGGTGAGCA ACAACATCAA ATCATGACGG CATTAGCGAA CGCTAACATC
AGCGTCGATG CTCGCAGCAT GGGGATCCGG ATTTCTCCGC ATATTTATAA CAATATGGCC
GATATCAAGC TGTTACTGGA CGTGATAAAA GCCAATCGGT AG
|
|---|
| Protein sequence | MFEDFKKDFY LAGPGYLLNH SVGRPLKSTE QVFKEAFFAP WQESGREPWG QWLSVIDDFT
FALSKLFNGH QKDFCPQVNL SSALTKIVMS LDRLNREHAV VLMSEIDFPS MGFALKKALP
ASCEVRFIPK GLDVTDPNVW DAHISRDVDL VFVSHAYSNT GQQAPLANIF TIARERGCLS
LVDVAQSAGI IPLDLARLQP DFLIGSSVKW LCGGPGAAYL WVNPAILDSC QPKDVGWFSH
ENPFEFDIHD FRYQHSAMRF WGGTPSIAPY AIAAHSIHYL AGLGIPLLRK CNQQLIDAVA
QELEHEFVSP RDVEKRSGTL ILQFGEQQHQ IMTALANANI SVDARSMGIR ISPHIYNNMA
DIKLLLDVIK ANR
|
|---|
| |