| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0295 |
|---|
| Symbol | |
|---|
| ID | 5373170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 334525 |
|---|
| End bp | 335481 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640828496 |
|---|
| Product | Zn-dependent hydrolase of the beta-lactamase fold |
|---|
| Protein accession | YP_001364529 |
|---|
| Protein GI | 152998848 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA GTATTCCAGA TAAGAGCCCA AACCAGCCAT TACCGATCCA AAAAATGCAG
CTAAACCCAA CGGCCGATGT GACACCTATG TTGTATAAAA TCAGCCATTC GGCAGTGCTG
TTACAACTCA ACGGTCAATA TTGGTTAACC GATCCTGTGT TTTCGAAACG CGCCTCGCCA
AGCCAAATGT TTGGGCCAAA ACGATTCCAC GAGTTGCCGA TCGAACTCGA TAATATTCCA
GTGCTCGCAG GGATTATTTT GTCCCACGAT CATTATGATC ATTTAGATAA ATACAGCATT
TTAGCCCTCG CCGAGCGCAC GCAAAAATTT ATCGTGCCAC TGGGCGTAGA TAAACATTTA
CTCGCGTGGG GCGTGCCTGC CAGCAAGATA GTCGCGCTCG ATTGGTGGCA AGAAACCCAA
CATGCGGGTC TGAGTTTTAC CGCGACGCCG GCACAGCACT TTTCGGGCCG TGGTATCACG
GACAAAAACC AAACCCTGTG GGCATCTTGG GTTCTTCAGT CCCCTGAACT AAAACTGTTT
TTCAGCGGTG ATTCCGGTTA CTTCGACGGC TTTAAAAAGA TTGGCGACAG ACTTGGGCCT
TTCGATTTAA CCTTAATCGA AACAGGTGCC TACGATGAGA TGTGGGCAGA TATCCACATG
CAGCCAGAGC AATCACTGCG GGCGCATTTA GATCTGCGGG GACGACACTT AATTCCGATA
CATAACAGCA GCTTCGATCT CGCGCTACAT AGTTGGTACG AGCCATTGGA ACGCATAGCC
GTAGCCGCCA AGGCCTATGA CGTGCCGCTG CTTACGCCGG AATTTGGTCA AGGGATCAAC
CTGAGTGAAT TAGCCCATAG CCCAGCTTTG AATCACGCTT GGTGGAAAGC CTATTTACCC
AAAGACAGAA CCGAGTTTGA AATCATTCCG GCGCGCATGA GTTCAGATAA GTTTTAA
|
|---|
| Protein sequence | MTESIPDKSP NQPLPIQKMQ LNPTADVTPM LYKISHSAVL LQLNGQYWLT DPVFSKRASP
SQMFGPKRFH ELPIELDNIP VLAGIILSHD HYDHLDKYSI LALAERTQKF IVPLGVDKHL
LAWGVPASKI VALDWWQETQ HAGLSFTATP AQHFSGRGIT DKNQTLWASW VLQSPELKLF
FSGDSGYFDG FKKIGDRLGP FDLTLIETGA YDEMWADIHM QPEQSLRAHL DLRGRHLIPI
HNSSFDLALH SWYEPLERIA VAAKAYDVPL LTPEFGQGIN LSELAHSPAL NHAWWKAYLP
KDRTEFEIIP ARMSSDKF
|
|---|
| |