Gene Shew185_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0287 
Symbol 
ID5373324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp326354 
End bp327610 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content49% 
IMG OID640828488 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001364521 
Protein GI152998840 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTGA TCATTGGGGC GCTGCTATTT GCCCTCTATC GACAGTTGAT CATCGAGCAA 
CAGTATCAAG TGACTCAATA TTTAGAGTCA GAGACCCAAC GTTATCAGCA ACTTGCCCTA
ACGGTTGACC GCCGTAGTTT TGCCGCTCAA ATCCGCGCCG CCGATCCACA AACCGCCCTA
ATCGCTTGGC GTAATAGCTA CGATATGGTC GGTGCCTTGA GCTTTATGCC CGAAGGCATG
CCCATGCTGC CGCAAACGCG AGATTTCCCC ATCTTAACCG GTGGCCCAGA TAAGCTGCAT
ATTCTTACCG GCGGGCTAGT GATGACCCGC TACGGCCCAG TGTTGATTGC GACCCGTACC
GATAACTTAG CGACGTTAAT CGATAAGTTT ATCAGCGCTG CGGCGACAGC CGTGATGCTT
ACGATAGTGT TGACCTTAGC GCTCGGCTAT CTATTTTCTA AGGCGATTTT ACGTCGATTA
GTGCAATACA ACCGCTTGAG TGAACAGATT GAACGCGGCC ACTATGACAC CCGCTTGCCC
TTGAGTTGGC GTCAGGATGA GTTTGATATG TTGGCGCTAC AGTTTAATAA TGTGCTGGAT
ATCCTCGAAA ATAACCTGAT GGCAGTGCGC GGCGCGACCG ATAATATCGC CCATGATTTA
CGTACTCCAC TGTCACATAT CCGCATTGGT CTTGAAGAGC TGGCGAGTAA ACCCAGCGAT
GAGATTAGCG AAGGTTGCGC GATTTTGACC GAAGAGCTCG ACCATTGTTT AGCGACATTT
GATGCCATGT TGTCACTCAC GCGTATCGAA GAAGGTCAGC AGACGCTCGA TTTACAGGAG
TTAAGCCTAG CGCAACTGTG TACCGATTTG TTGGACATGG CCGATGCCGT GGCAGAATCC
AATGAGCAAA CCTTGAGTTT GTCGCTGTTG GCTGACCATA AGGTATTTGG TGATAAATAC
TTATTATTCC AAGCTTTATA TAATCTCGTC GATAACGCGA TGAAGTATTC TGGCCAAGGT
GCGCGGATTG AAATTATTCA GTCAGGCCCA CAAATTCAGA TCCGCGATAA TGGCCCAGGT
ATTCCCGACG ACAGTAAAGA AAGAGTGTTC GAACGCTTAG TGCGCCTCGA CCCCAGCCGG
CATTTACAGG GTACAGGTTT AGGATTATCT ATGGTCAAAG CGATTCTCTC ACGGCACAAT
GCCAAAATTA ATCTCACGGA TAATCATCCC GGCTTAGTGG TCACTATTAA GTTTTAA
 
Protein sequence
MTVIIGALLF ALYRQLIIEQ QYQVTQYLES ETQRYQQLAL TVDRRSFAAQ IRAADPQTAL 
IAWRNSYDMV GALSFMPEGM PMLPQTRDFP ILTGGPDKLH ILTGGLVMTR YGPVLIATRT
DNLATLIDKF ISAAATAVML TIVLTLALGY LFSKAILRRL VQYNRLSEQI ERGHYDTRLP
LSWRQDEFDM LALQFNNVLD ILENNLMAVR GATDNIAHDL RTPLSHIRIG LEELASKPSD
EISEGCAILT EELDHCLATF DAMLSLTRIE EGQQTLDLQE LSLAQLCTDL LDMADAVAES
NEQTLSLSLL ADHKVFGDKY LLFQALYNLV DNAMKYSGQG ARIEIIQSGP QIQIRDNGPG
IPDDSKERVF ERLVRLDPSR HLQGTGLGLS MVKAILSRHN AKINLTDNHP GLVVTIKF