Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0287 |
Symbol | |
ID | 5373324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 326354 |
End bp | 327610 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828488 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001364521 |
Protein GI | 152998840 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGTGA TCATTGGGGC GCTGCTATTT GCCCTCTATC GACAGTTGAT CATCGAGCAA CAGTATCAAG TGACTCAATA TTTAGAGTCA GAGACCCAAC GTTATCAGCA ACTTGCCCTA ACGGTTGACC GCCGTAGTTT TGCCGCTCAA ATCCGCGCCG CCGATCCACA AACCGCCCTA ATCGCTTGGC GTAATAGCTA CGATATGGTC GGTGCCTTGA GCTTTATGCC CGAAGGCATG CCCATGCTGC CGCAAACGCG AGATTTCCCC ATCTTAACCG GTGGCCCAGA TAAGCTGCAT ATTCTTACCG GCGGGCTAGT GATGACCCGC TACGGCCCAG TGTTGATTGC GACCCGTACC GATAACTTAG CGACGTTAAT CGATAAGTTT ATCAGCGCTG CGGCGACAGC CGTGATGCTT ACGATAGTGT TGACCTTAGC GCTCGGCTAT CTATTTTCTA AGGCGATTTT ACGTCGATTA GTGCAATACA ACCGCTTGAG TGAACAGATT GAACGCGGCC ACTATGACAC CCGCTTGCCC TTGAGTTGGC GTCAGGATGA GTTTGATATG TTGGCGCTAC AGTTTAATAA TGTGCTGGAT ATCCTCGAAA ATAACCTGAT GGCAGTGCGC GGCGCGACCG ATAATATCGC CCATGATTTA CGTACTCCAC TGTCACATAT CCGCATTGGT CTTGAAGAGC TGGCGAGTAA ACCCAGCGAT GAGATTAGCG AAGGTTGCGC GATTTTGACC GAAGAGCTCG ACCATTGTTT AGCGACATTT GATGCCATGT TGTCACTCAC GCGTATCGAA GAAGGTCAGC AGACGCTCGA TTTACAGGAG TTAAGCCTAG CGCAACTGTG TACCGATTTG TTGGACATGG CCGATGCCGT GGCAGAATCC AATGAGCAAA CCTTGAGTTT GTCGCTGTTG GCTGACCATA AGGTATTTGG TGATAAATAC TTATTATTCC AAGCTTTATA TAATCTCGTC GATAACGCGA TGAAGTATTC TGGCCAAGGT GCGCGGATTG AAATTATTCA GTCAGGCCCA CAAATTCAGA TCCGCGATAA TGGCCCAGGT ATTCCCGACG ACAGTAAAGA AAGAGTGTTC GAACGCTTAG TGCGCCTCGA CCCCAGCCGG CATTTACAGG GTACAGGTTT AGGATTATCT ATGGTCAAAG CGATTCTCTC ACGGCACAAT GCCAAAATTA ATCTCACGGA TAATCATCCC GGCTTAGTGG TCACTATTAA GTTTTAA
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Protein sequence | MTVIIGALLF ALYRQLIIEQ QYQVTQYLES ETQRYQQLAL TVDRRSFAAQ IRAADPQTAL IAWRNSYDMV GALSFMPEGM PMLPQTRDFP ILTGGPDKLH ILTGGLVMTR YGPVLIATRT DNLATLIDKF ISAAATAVML TIVLTLALGY LFSKAILRRL VQYNRLSEQI ERGHYDTRLP LSWRQDEFDM LALQFNNVLD ILENNLMAVR GATDNIAHDL RTPLSHIRIG LEELASKPSD EISEGCAILT EELDHCLATF DAMLSLTRIE EGQQTLDLQE LSLAQLCTDL LDMADAVAES NEQTLSLSLL ADHKVFGDKY LLFQALYNLV DNAMKYSGQG ARIEIIQSGP QIQIRDNGPG IPDDSKERVF ERLVRLDPSR HLQGTGLGLS MVKAILSRHN AKINLTDNHP GLVVTIKF
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