| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0258 |
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| Symbol | |
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| ID | 5371813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 296660 |
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| End bp | 298072 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828459 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001364492 |
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| Protein GI | 152998811 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATTA GTGAACAAGT GTGGATCCTC GACGATGACA GCTCGATACG TTGGGTACTC
GAAAAGGCAC TTCAAGGTGC CAAGCTCAGT ACCGCCAGCT TTGCCGCCGC CGAATCCCTG
TGGCAGGCCT TAGAAATATC GCAACCGCAC GTGATTGTGT CGGACATCCG TATGCCAGGC
ACAGACGGTT TAAGCCTGCT CGAACGATTG CAAGTACATT ACCCCCATAT TCCCGTGATC
ATTATGACGG CGCACTCAGA CTTAGACAGC GCAGTCAGTG CCTATCAAGC GGGCGCATTT
GAGTATCTGC CTAAACCCTT CGACATCGAT GAGGCGATCT CTCTGGTCGA GCGCGCACTC
ACCCATGCCA CTGAACAGAG CCCCGCACCC GCGCAGGAAG CCCAAGTCAA AACACCCGAA
ATCATAGGTG AAGCGCCAGC GATGCAGGAA GTGTTTCGCG CCATAGGCAG GCTTTCACGA
TCATCCATCA GCGTGCTAAT CAATGGCCAA TCTGGGACAG GTAAAGAACT CGTGGCGGGT
GCATTACACA AACACAGCCC ACGTAAAGAT AAGCCATTTA TCGCGCTGAA CATGGCTGCG
ATCCCTAAGG ATTTGATCGA ATCTGAGCTA TTCGGCCACG AAAAAGGTGC CTTCACTGGT
GCAGCCAATG TGCGCCAAGG TCGCTTCGAA CAAGCAAACG GTGGCACGCT CTTTTTAGAT
GAAATCGGCG ATATGCCGTT AGATGTACAA ACACGGTTAC TCAGAGTGCT CGCCGATGGT
CAATTCTACC GCGTCGGTGG TCATAATGCG GTGCAAGTGG ATGTGCGTAT CATAGCGGCG
ACCCATCAAG ATCTTGAATT ATTAGTGCAA AAAGGCGGCT TTAGGGAAGA CTTATTCCAT
CGCCTCAACG TGATCCGCGT GCACTTACCG CCACTGTCAC AAAGACGGGA AGACATTCCC
CAACTCGCCA CCCACTTCCT CGCCTCGGCA GCAAAGGAAA TTGGTGTAGA AACTAAGATC
ATGACCAAGG AAACCGCGGT AAAACTCTCC CAATTGCCTT GGCCCGGTAA TGTCAGACAA
CTCGAAAACA CCTGCCGCTG GTTAACCGTA ATGGCATCGG GGCAAGAAAT TTTACCCCAA
GATTTACCGC CAGAATTACT GAAAGATCCT GTGAGTGTCA CCCACACGGC GAAAGGCAGC
CAAGATTGGC AATCGGCCCT GACTGAGTGG ATAGATCAAA AACTCTCTGA AGGAAACAGC
GATCTGTTAA CAGAGGTGCA ACCCGCATTC GAACGCATAC TGCTAGAAAC TGCGCTGCGC
CATACCCAAG GCCATAAACA AGAAGCGGCG AAACGTTTAG GCTGGGGACG AAATACCTTA
ACACGGAAAT TAAAAGAACT GTCGATGGAG TAA
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| Protein sequence | MRISEQVWIL DDDSSIRWVL EKALQGAKLS TASFAAAESL WQALEISQPH VIVSDIRMPG
TDGLSLLERL QVHYPHIPVI IMTAHSDLDS AVSAYQAGAF EYLPKPFDID EAISLVERAL
THATEQSPAP AQEAQVKTPE IIGEAPAMQE VFRAIGRLSR SSISVLINGQ SGTGKELVAG
ALHKHSPRKD KPFIALNMAA IPKDLIESEL FGHEKGAFTG AANVRQGRFE QANGGTLFLD
EIGDMPLDVQ TRLLRVLADG QFYRVGGHNA VQVDVRIIAA THQDLELLVQ KGGFREDLFH
RLNVIRVHLP PLSQRREDIP QLATHFLASA AKEIGVETKI MTKETAVKLS QLPWPGNVRQ
LENTCRWLTV MASGQEILPQ DLPPELLKDP VSVTHTAKGS QDWQSALTEW IDQKLSEGNS
DLLTEVQPAF ERILLETALR HTQGHKQEAA KRLGWGRNTL TRKLKELSME
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