| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0249 |
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| Symbol | |
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| ID | 5372336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 286647 |
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| End bp | 288527 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828450 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001364483 |
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| Protein GI | 152998802 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTA AACCGCATTT ACCATCGACA CAGGCGTGGT TGGCCGATTC GTGGCAGCGC
AGCATTGGCG CTGGCTTGTC AGAATTTCAG TTACCCCAAG AGCTTAGACT CGACGCCAGC
GAACTAAAGC AGAAACATGA GCAATATCAA ATGCTCATTG CATTAGTGCA ATCCCATGCT
TTGCCTTTGT TCAATCAGTT GATGGCGCAT TCTAATAGCC GACTCTTGCT CTCCGATGCC
GAGGGTTATG TGCTTAGGCA CTGGGGCGTG AGCCGTTACT CCACAAAACT GGCGGACGTG
GCTTTGGATA TCGGGGTGAA TTGGCTCGAG CAGCACAAAG GCACCAATGC AATAGGGACG
GCACTCACAG CCAAACAAGC CGTATCTGTA GTGGGTGAGC AGCATTTTAT TCGTCAGAAT
CGTTTTATGA GTTGCACCGC CTGCCCGATA TTTTCTCCCC AAGGTGAGAT GCTCGGGGTG
ATAGATATCA CCAGTGAGCA GCAAAGACAC ACACAGCAGA CGTTGATGTT AGTATCGAGC
TTGGCGCAGC AGGTCGAGAC CGCGCTCTTG TGTCATCTGC CCGATAGCCG TTATCGAATC
GATTTAGCGG CGCAGCCAAA CCTACTGAAT TCGGGTTGGC AGGGCATAGT GATTGCCGAC
AGTGATGGTC GCATTGTGGG GTGCAATCCC ATGGCGAAAC AATTGCTTAG TAATGCCAAG
GTTGGCGATT CAGTCGAGCA GTACTTAGGC AATAATTGGA GCCGTGCGGG TGGCTTTAAT
CAGCATTTAG ACTTGCATCT ACTGACTCAG CCCTTAAATA TTCCCAGCAT CAAGAGTCGG
GTAGCGACTA GTAATAAATC GCTTAATCAA CTGGGCGTGC GGTTTCGCGA CCCTCAACTT
GAGCGCGCAT GGCAACATGC CAATAAGGTG ATCACCAAGC AAATTCCGTT GTTAGTGCTC
GGTGAAACCG GCGTCGGTAA AGAGCAGTTT GTTAAAAAGC TCCACGCCCA GAGTGCGCGG
CGCAGCGAGC CCTTAGTGGC GGTGAACTGT GCGGCATTGC CTGCAGAGTT AGTCGAATCT
GAACTCTTTG GTTATCAGGC GGGCGCGTTT ACTGGGGCGA ACCGCACTGG ATTTATCGGC
AAAATTCGCC AAGCCCACGG CGGTTTTTTG TTTTTAGATG AAATAGGTGA AATGCCGCTG
GCGGCACAGA GTCGTTTACT CAGGGTATTG CAGGAGCGCG AAGTGGTGCC CGTTGGCAGT
AATCAAAGCT TTAAAGTCGA TATCCAAATC ATTGCCGCGA CCCATATGGA TTTAGAAAAA
CAGGTGACTC AAGGGCTGTT TCGACAGGAT TTATTCTATC GGTTAAATGG CTTGCAAGTG
CGTTTGCCTG CGCTGCGGGA GCGGCAGGAT ATCGAGCGCA TTATCCATAA ATTGCATCGT
AAACATCGCA TTGCGCTGCA GGCGATCTGC CCTGAACTGT TAGGACAGAT GATGCAACAC
GACTGGCCCG GCAATTTGCG TGAGCTGGAT AATCTTATGC AAGTCGCTTG CTTGATGGCT
GAAGGGGATG ACACCCTAAC TTGGCAGCAT TTACCCGATT ATCTTGCGGC CAAGCTAATG
TGCGAGCCGT TATGTGAAGA GGCTAAAACC TGCCAAGATG CTGCATCACA CCCGCTAAGT
AGCGGTATAG CACCCCAGCC CAATGCTCTA TTTTTAGCCG CAGAGACTGC AGATATCAAT
TCTCTCCATG GGGCGATTTA TAGCAATGTA CTGCAGGCAT TTCAGGCCTG TAATGGCAAT
GTGAGCCAAT GTGCCAAGCG CTTAGGAATT AGCCGTAATG CCTTATATCG TCGATTAAAA
CAGATGGGAC TTAAGGGTTA G
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| Protein sequence | MAVKPHLPST QAWLADSWQR SIGAGLSEFQ LPQELRLDAS ELKQKHEQYQ MLIALVQSHA
LPLFNQLMAH SNSRLLLSDA EGYVLRHWGV SRYSTKLADV ALDIGVNWLE QHKGTNAIGT
ALTAKQAVSV VGEQHFIRQN RFMSCTACPI FSPQGEMLGV IDITSEQQRH TQQTLMLVSS
LAQQVETALL CHLPDSRYRI DLAAQPNLLN SGWQGIVIAD SDGRIVGCNP MAKQLLSNAK
VGDSVEQYLG NNWSRAGGFN QHLDLHLLTQ PLNIPSIKSR VATSNKSLNQ LGVRFRDPQL
ERAWQHANKV ITKQIPLLVL GETGVGKEQF VKKLHAQSAR RSEPLVAVNC AALPAELVES
ELFGYQAGAF TGANRTGFIG KIRQAHGGFL FLDEIGEMPL AAQSRLLRVL QEREVVPVGS
NQSFKVDIQI IAATHMDLEK QVTQGLFRQD LFYRLNGLQV RLPALRERQD IERIIHKLHR
KHRIALQAIC PELLGQMMQH DWPGNLRELD NLMQVACLMA EGDDTLTWQH LPDYLAAKLM
CEPLCEEAKT CQDAASHPLS SGIAPQPNAL FLAAETADIN SLHGAIYSNV LQAFQACNGN
VSQCAKRLGI SRNALYRRLK QMGLKG
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