| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0203 |
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| Symbol | rplP |
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| ID | 5370199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 250103 |
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| End bp | 250513 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640828400 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001364437 |
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| Protein GI | 152998756 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000190565 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCAAC CTAAACGTAT GAAGTTTCGC AAGATGTTCA AAGGCCGCAA CCGCGGTCTA
GCGAACGGTA CCGAAGTTAG CTTTGGTACT TTTGGTCTGA AAGCAGTCGG CCGTGGCCGT
TTAACTGCCC GTCAGATCGA ATCTGCACGT CGTGCCATGA CACGTCACAT TAAGCGTCAG
GGACAAATTT GGATTCGAGT TTTCCCGGAC AAGCCGATTA CCTCTAAGCC TCTTGAAGTG
CGTATGGGTA AAGGTAAAGG AAACGTTGAA TACTGGGTAT GTCAGATTCA ACCTGGTAAG
GTTCTTTATG AGATGAATGG TGTTTCTGAA GTGATCGCTC GTGAAGCGTT TGCTTTGGCT
GCTGCCAAGC TTCCAATTAA GACTACCTTC GTAACTAAGA CGGTGATGTA A
|
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| Protein sequence | MLQPKRMKFR KMFKGRNRGL ANGTEVSFGT FGLKAVGRGR LTARQIESAR RAMTRHIKRQ
GQIWIRVFPD KPITSKPLEV RMGKGKGNVE YWVCQIQPGK VLYEMNGVSE VIAREAFALA
AAKLPIKTTF VTKTVM
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