| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0187 |
|---|
| Symbol | rplJ |
|---|
| ID | 5369409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 231631 |
|---|
| End bp | 232131 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640828384 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_001364421 |
|---|
| Protein GI | 152998740 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000330294 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAA GACTCGAAGA CAAAAAAGCG ATTGTTGCTG AAGTCAACGA AGCTGCCAAA
GGTGCGCTAT CTGCAGTTGC CGCTGATTCT CGCGGTGTGA CTGTAGGTGC TATGACCGGT
CTGCGTAAAA AAGCTCGCGA AGCTGGTGTA TATGTACGTG TAGTACGTAA CACATTGGCT
CGTCGTGCTG TTGAAGGTAC TGCTTTTGAG TGCCTAGCAG AGACGTTCAC TGGCCCAACT
TTGATCGCTT TTTCTTTAGA GCACCCAGGT GCTGCAGCAC GTCTGTTAAA AGACTTTGCT
AAAGAACAAG CTAACTTCGA AGTTAAAGGC GCAGCCTTTG AAGGGAATTT CATCCCTGCA
GCTGAAATTG ATCGTTTGGC GAAACTGCCA ACATACGAAG AAGCACTAGC TCAGTTAATG
ATGACTATGA AAGAAGCATC TGCTGGCAAG TTCGTTCGTA CACTGGCCGC CCTGCGCGAT
CAAAAACAAG AAGCCGCTTA A
|
|---|
| Protein sequence | MALRLEDKKA IVAEVNEAAK GALSAVAADS RGVTVGAMTG LRKKAREAGV YVRVVRNTLA
RRAVEGTAFE CLAETFTGPT LIAFSLEHPG AAARLLKDFA KEQANFEVKG AAFEGNFIPA
AEIDRLAKLP TYEEALAQLM MTMKEASAGK FVRTLAALRD QKQEAA
|
|---|
| |