Gene Shew185_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0176 
Symbol 
ID5373101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp215112 
End bp216209 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content45% 
IMG OID640828364 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001364410 
Protein GI152998729 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.148252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAG CAGCAATGGA TCCTCAGACT TATGATACGC AGTTAGAACA CAAGCGTATC 
AAGCTAGAAC AAGCCTTTGC CCAATTTGAA ACACCGAGTG TTGAAGTTTT TGCCTCAGAG 
CCTGCCAACT ACCGTATGCG TGCTGAATTC CGCATGTGGC ATGACGGTGA CGACTTATAC 
TATTACATGT TCGATAAAGT ATTGAATGAG AAAGTGCGAT GCGATCAATA CTTGCCAGCC 
AGCGTGCTCA TCAATCAAAT GATGTCGGCC TTAATCGCCG AACTAAAACC GAATCCTAGT 
CTAAGACATA AACTGTTCCA AGTGGATTTT TTGTCGACCT TAAGCGGCGA GATTTTAGTG 
TCCTTGCTTT ATCACAGACA GCTTGATGAC CAATGGCGCG CCGATGCGGC TGCACTAAAA 
ACCAAGTTAA GCAGCCAATT CAACGTCAAT ATCATCGGCC GTGCCCGTAA GCAAAAGATC 
GATTTAGATA AAGACTTTGT GGTCGAGTCA TTACAAGTGA ATGATAAAAC CTTCTTATAT 
AAGCAAATCG AGAACAGCTT TACTCAACCC AATGCTAAAG TTTCTGTAAA AATGTTGGAG 
TGGGCTATCG ATGCGACTCA GGACAGTGAA GGTGATTTAC TCGAACTCTA CTGTGGTAAT 
GGCAACTTCT CTATCGCACT GGCGCAAAAC TTTAATCGCG TATTGGCCAC CGAACTCGCT 
AAGCCTTCAG TCGATGCGGC ACAATACAAT ATCGAAGTGA ATGGTATTGA GAATCTGCAG 
ATTATTCGCA TGTCGGCCGA AGACTTTAGC GATGCCATGG CGAAGAAACG CAGCTTTAGA 
CGTTTAGAAG GTATCGATCT CGACAGCTAT GTGTGCAACA CCATTTTTGT CGACCCACCA 
CGCGCAGGGA TTGATCCTGA TACGTTGGCA TTAGTACAAG GTTACGAGCG GATCTTATAT 
ATTTCCTGCA ACCCTGAAAC CTTAAAAGAC AACCTGCAGC TACTGAACGA AACCCATAAA 
GTCACTCGCT TCGCCTTGTT TGATCAGTTC CCTTATACCG AACACATGGA AACAGGTGTT 
CTACTGGAGC GTCGTTAG
 
Protein sequence
MNLAAMDPQT YDTQLEHKRI KLEQAFAQFE TPSVEVFASE PANYRMRAEF RMWHDGDDLY 
YYMFDKVLNE KVRCDQYLPA SVLINQMMSA LIAELKPNPS LRHKLFQVDF LSTLSGEILV 
SLLYHRQLDD QWRADAAALK TKLSSQFNVN IIGRARKQKI DLDKDFVVES LQVNDKTFLY 
KQIENSFTQP NAKVSVKMLE WAIDATQDSE GDLLELYCGN GNFSIALAQN FNRVLATELA 
KPSVDAAQYN IEVNGIENLQ IIRMSAEDFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP 
RAGIDPDTLA LVQGYERILY ISCNPETLKD NLQLLNETHK VTRFALFDQF PYTEHMETGV 
LLERR