Gene Shew185_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0170 
Symbol 
ID5373682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp208316 
End bp208927 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content48% 
IMG OID640828358 
ProductTetR family transcriptional regulator 
Protein accessionYP_001364404 
Protein GI152998723 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAC GAAAAGAACA CAGCCATGAT GAAATTCGCG TGATGGCAAT ACAAGCGGCA 
ACTGAGTTAC TGACCGAGCA AGGTGTTGTC GGGCTGAGCT TGCGCAAAGT GGCCAGCCAA 
ATTGGCTATG TCCCTAGTAC CTTGATCAAT ATTTTCGGCA GTTATAACTA TTTGCTACTG 
GCCGTTTCTG AGTCAACGCT TAGGACTTTA CATGACAGAT TAGCGGGTGT TTGCGCGGTT 
GACAGTTTGC GTAAAATCAT TGCAATGGCG TGGGAGTATA GTCAATTCGC CCATGAACAG 
CGCCAAGCTT TCAAACTGGT TTTTGAGTTG CAATTACTCG ATTCTGAGCC GCTGCCGCAA 
TCACAAGGAC AATTGATTGC AGGGTTATTC ACACTGATTG AACGTGAGTT AGCGCAGCTC 
TTCCCAGAGG CGACACCGGA GCAGCATCTC AGTATGAGCC GTGTGTTGTG GGGGGGGATT 
CATGGGTTAA CTGCTTTGTC CCTCGATAAT AAGCTCTTTG CTGAATCGTT ATCACTGCGG 
GATTTACTCG AGAGCCATGT GCAGGCTTAT CTACAAGGAA TGGGTTACCA GAGGGAACTA 
TCATGTTGCT AA
 
Protein sequence
MARRKEHSHD EIRVMAIQAA TELLTEQGVV GLSLRKVASQ IGYVPSTLIN IFGSYNYLLL 
AVSESTLRTL HDRLAGVCAV DSLRKIIAMA WEYSQFAHEQ RQAFKLVFEL QLLDSEPLPQ 
SQGQLIAGLF TLIERELAQL FPEATPEQHL SMSRVLWGGI HGLTALSLDN KLFAESLSLR 
DLLESHVQAY LQGMGYQREL SCC