| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0162 |
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| Symbol | |
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| ID | 5371595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 190088 |
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| End bp | 192133 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828350 |
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| Product | phytanoyl-CoA dioxygenase |
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| Protein accession | YP_001364396 |
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| Protein GI | 152998715 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAAA GTTCAGAGCG TGAATTAGAA CAGAGTGTGA ATGTCGTCGC GTTAACTCAG
TTTGCTAACG CGCTATTGCT GTCAACCTCG GCAGGGGAGT CTAAACGGCT AATCGATCCC
ATATTGGAGC AGTTATGCCA AATAACCGCG GTGGAATTGC ACCCCGAGTA TTTTTTGGAT
ACTGAGGCGA GTATTACGCT TTATGGTAAG GCCGTTTCGC TCACTACTGC GGCGCAGTGT
GCAGAAGATC CTGAGCGGGG GCGAGTGTTT ATTCAGGGCA TTTATCAGGT CATACAGGAT
AAGTTGGCGC TAAATCCGCA ACGGCCAATA CAGATTTTGT ATGCGGGTAC AGGACCTTTT
GCCTGGTTGT TATTACCATT ACTGCCGCTG TTTTCTGCGA GTCAGATTCA AGTCACCTTG
CTCGACATTC ACCCTGCCTC GTTAGATAAA GTCACCAAGC TTATTGAACA CTTTGATTTA
GCAGATCGTG TGGCAACGTA TGTCTGCGCC GACGCCACAG TTTGGCAACC AGAAGCTGCA
GTAAAGTTCG ATATGATAGT CTCTGAAACC ATGAAGCATC TGCTGCAACA GGAGCCTCAA
GTCCAGATAT TCAGCCACTT ACAGGCGTAT CTTGCGGATG GCGGCGTGCT GATTCCGCAA
AACATTGAAC TAGACGCTTG GCTTGAGTCT TGTACTGTGC AGGATTTAGC TGAGACGCAT
TATTTAGGGC CTTTGTTTGC ACTCAACCTG CAAACTGCGC GCTTACTTGC CGATGGAGAT
CGTAGCTTCT TGGCTGGTAC TTTACTGCTC CCCGATTTCA GCCCGAGTGC GGTAACGCTT
AAGTTCACGA CTTCCATTCA AGTCTATGGT AATTCCACGC TGAGCGAAAA CCAATCCCAA
CTCACTCTAC CTCGATATCG ACGCGAGCAT TGGCTTAAGC CTCTTTCATG CCTTGCTTTT
CGATATGAGC AGGGCGCTCA TCCCGATTTT GTTTTTGATG TTATAGAGCA AAAACCAGTG
CTGGTGTCGA GTGACGATCT GAGCTGCTTA GGCATTTACC ATTTGCAGCG GCTTTGGCAA
AAGATACAGC TACGTAAGCG GGGAGTGCCA TTCACTGAAC GGGCAAATGA ATGGCACTTA
GATAAAACCT TGCTGGATCT TTGTGGCATA GGGCTAGAGC CGGGTCTAAG AGCTTTATAC
CAACACGATC ATCAGTCAGC TTTTGGCACT TACATTCAGC AAACAGCCAA GCTGACAGCC
GCGGATATTG CTCGGATTAA TCAGCAATTA AGCACTATTT CCCATGGATT AACGTCATCG
GTCACAATGC CAGAAGTCGA TGATTTAAAT TCAATAGAGG TTGAAGACTC AAATCCGGCT
GCATTACTCA GCGAGTCACA ACTCAATTTT TGGCGTAGTG AAGGCTACTT AGTGATCCCG
CATGTGCTTA CGGCAGAGCA ATGCGCCGCA ACTCGAGATT TTATTTGGCA GCAGTTAGGG
GCAAATGAAC AAGATCCCGC CACTTGGTAT CAAGCTCATG AGTTTATGCA GAAAATAATG
CTACAACTGT TTCGCCATCC GCAACTGGAC GCGAATCGAC AAGTCCCCAA AATTCGTCAA
GTGTTTGAAC AGCTATGGCA GCGAACCGAT TTAGTCATGA CAACCGACAG AGTCAGCTTT
AATCCACCTG AAACACCCAC TTGGCGTTTT CCCGGGCCAG ATATGCACTG GGATATGCCA
CTGCAGCTAC CCGTTGAGTT TGGCACTCAA GGGTTAATTT ACTTAACCGA TACCAGTGTT
GACCAAGGCG CATTTTGTTG TGTCCCAGGA TTTCATCTCA AGATAGAGGA GTGGCTCCGT
AGCTCAAAAA AGCCTGATAT CGAGCTGCAG CAACAGGATT GGAGCAAGTG GCCTGTTAAA
TCCATAGCCG CAAATGCAGG TGATTTAATC ATTTGGCACC ATGCCTTGCC CCATGGTGCG
AGTCCGAATC GAGCCAAGTT ACCGCGTATG GTGCAATACA TTAACTTTTA TCCTATGGCT
TGCTAA
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| Protein sequence | MLQSSERELE QSVNVVALTQ FANALLLSTS AGESKRLIDP ILEQLCQITA VELHPEYFLD
TEASITLYGK AVSLTTAAQC AEDPERGRVF IQGIYQVIQD KLALNPQRPI QILYAGTGPF
AWLLLPLLPL FSASQIQVTL LDIHPASLDK VTKLIEHFDL ADRVATYVCA DATVWQPEAA
VKFDMIVSET MKHLLQQEPQ VQIFSHLQAY LADGGVLIPQ NIELDAWLES CTVQDLAETH
YLGPLFALNL QTARLLADGD RSFLAGTLLL PDFSPSAVTL KFTTSIQVYG NSTLSENQSQ
LTLPRYRREH WLKPLSCLAF RYEQGAHPDF VFDVIEQKPV LVSSDDLSCL GIYHLQRLWQ
KIQLRKRGVP FTERANEWHL DKTLLDLCGI GLEPGLRALY QHDHQSAFGT YIQQTAKLTA
ADIARINQQL STISHGLTSS VTMPEVDDLN SIEVEDSNPA ALLSESQLNF WRSEGYLVIP
HVLTAEQCAA TRDFIWQQLG ANEQDPATWY QAHEFMQKIM LQLFRHPQLD ANRQVPKIRQ
VFEQLWQRTD LVMTTDRVSF NPPETPTWRF PGPDMHWDMP LQLPVEFGTQ GLIYLTDTSV
DQGAFCCVPG FHLKIEEWLR SSKKPDIELQ QQDWSKWPVK SIAANAGDLI IWHHALPHGA
SPNRAKLPRM VQYINFYPMA C
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