| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0160 |
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| Symbol | |
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| ID | 5373076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 188681 |
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| End bp | 189343 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828348 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001364394 |
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| Protein GI | 152998713 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAACT GGAAGACTAT CGATACGGTT CTGCTCGACA TGGACGGCAC ACTATTGGAT
TTGCACTTCG ATAATCATTT TTGGCTGAGT TTAGTGCCAC AGGAATTAAG CAAGCAACGG
GGTCTGAGCA AAGACGAAGC GCAGCAGTTA GTTGTCAACG CCTACGAGAG AGTTGTCGGC
ACGTTAGATT GGTACTGCCT CGATTATTGG CAGGAGCAGC TACAACTCGA CATTATGGGT
TTGCATCGCA CTTTAGTGGA TCGCATTCAG CTGCGCCAAG ACAGTATGCC GTTTTTAGCT
GCCTTAGCCG CTGCGGGTAA ACAGCGGATT TTGGTGACCA ATGCGCATCC TAAGAGTCTC
GCCCTAAAGC TTGAACATAC CGAACTAGCA ACAGGGCTCG ATGCCATGAT CTCCAGCCAC
GAAACAGGTT ACCCCAAGGA GCATCCGCAA TTTTGGCTAA CCTTATTTGA AAAGTTTCAA
CTTGAGCCAA GTCGCTGTCT CTTTATCGAC GACAGCGAAG CCATACTCAA GGCCGCTAAA
CTTGCCGGCG TAGGCCATCA ATTGGGGATT GCTAACCCAG ACAGTAAAAA GCCAGTCAAA
GTCTTTCAAG ATTTCCCCGC GATTACCGAC TATCACTCGC TACTCAATGA TCTAACACGA
TAA
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| Protein sequence | MFNWKTIDTV LLDMDGTLLD LHFDNHFWLS LVPQELSKQR GLSKDEAQQL VVNAYERVVG
TLDWYCLDYW QEQLQLDIMG LHRTLVDRIQ LRQDSMPFLA ALAAAGKQRI LVTNAHPKSL
ALKLEHTELA TGLDAMISSH ETGYPKEHPQ FWLTLFEKFQ LEPSRCLFID DSEAILKAAK
LAGVGHQLGI ANPDSKKPVK VFQDFPAITD YHSLLNDLTR
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