Gene Shew185_0159 details

Gene Information

• Locus tag: Shew185_0159
• ID: 5371645
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 187840
• End bp: 188601
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640828347
• Product: type II secretion system protein N
• Protein accession: YP_001364393
• Protein GI: 152998712

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTTTGA TAAAAAAAGT CATCATAGGC GTACTGATTT ATTTAGTATT TTTAGTCGTT 
CTATTTCCCG CTAAGATTGC GATAGCGTTA GCGCCATTAC CTGCAAATAT CAGTGTTTCG 
GGTGTGAGCG GCAGTATTTG GTCTGGCAGC ATAGAAACCT TAAGTATGCC GCAACGCCAG 
TTAGAACAAG TGCGTTGGGA TCTCAGCCCT TGGGCCTTGT TGTTAGGTAA AGTGAAAGTT 
GATTTTCAAG TGGGCAGCCG CGCAACGCCG GTTAGCGCTA AGGGATTAGT CTCTTGGTCC 
ATGGGCGGCT TAAGTGCGCA GGGTTTACGT TTCGAAGCGC CAGATAGCTT TTTACTCGGC 
AATGCAAAAC TGCCCTTTAA AACCGAAATA TCCGGTGAAG TTAGCCTATT AGTCGAGACG 
TTAGAGCAAG GTAAACCTTG GTGCGAGCAG TTATCTGGTA AGCTGTTTTT GAATCAAACC 
AATGTTAAAA ACCAGTTTGG CAACTATCCA CTAGGCAATA TCGAACTCGG CCTGAGTTGC 
GTAGACGGCA AAGCGCAATT AGCCACAGAT GAAGCCAAAA ACCAGCTCGG CATCGTCGGC 
ACCTTGCAGT TAGATGAAGG CAATATGGTC AAAGTAGCAG CTAAGATTAA AGAAACGGCT 
GAGCAACCAG AAGATATGCG TAAGTCACTG GGTATGCTAG GCAAACGCGG CAGCGACGGT 
TATTTCCCCG TGGTATATCA GGGTCGTATT CCTGGGTTAT AG 

 

Protein sequence

MSLIKKVIIG VLIYLVFLVV LFPAKIAIAL APLPANISVS GVSGSIWSGS IETLSMPQRQ 
LEQVRWDLSP WALLLGKVKV DFQVGSRATP VSAKGLVSWS MGGLSAQGLR FEAPDSFLLG 
NAKLPFKTEI SGEVSLLVET LEQGKPWCEQ LSGKLFLNQT NVKNQFGNYP LGNIELGLSC 
VDGKAQLATD EAKNQLGIVG TLQLDEGNMV KVAAKIKETA EQPEDMRKSL GMLGKRGSDG 
YFPVVYQGRI PGL