| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0155 |
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| Symbol | |
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| ID | 5369418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 184297 |
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| End bp | 185070 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828343 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001364389 |
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| Protein GI | 152998708 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTAA AACTGACTAG TGCGCAGCGG GGATTTACCC TACTAGAAAT GCTGATCGCC
ATCGCGATTT TCGCCATGAT AGGTTTGGCT TCTAATGCCG TGCTCAGCAC TGTGCTGACT
AACGATGAAG TGACGCGCAC TTTCTCTACT CGGCTTAAAG CCCTGCAGCA AGGCTTTGGT
GCGATTGAGC GTGATCTCGC CCAAATGGTG GCGCGTACAC CCAGATTACT CGAAGGGGGT
CGAGGTTCGA CCGTCTTCCA AACGGGCAAT GATATCTTAG ACTCGGAATC AGAAGCCTTA
GTGTTTTACC GTTTAGGTTG GTTAAATCCC GACGGTTTAT TACCGCGGGG CAGCTTACAG
TCTGTGGCGT ATGTGGTGCA CGAAGGGCGA CTGGAGCGTT GGTATTTTCC TTATCCTGAG
CCTGAATTTG GTGCCGAGCC GATTAAGACA GTGGTCATAG ATAAAGTATT GTCGGTGGAA
TATTCCTTCT TTATGGATGA CAAGTGGGAG CGCAAAGTCG AGGCGACTAA ATTGCCTAAA
GCGATCGCCA TGGAAATTGA GATTGAAGGC TTAGGCAAGA TCCAACGTAA GTTCTTGTTA
CCGCTAGGCG CTGCTGCACC TGACAAGTCC AAAGATGAAG ACAATAAAGA CGAAAATCCG
GACGATGCTA ACAAAGATAA AAATGACGAC GGCAGTGGAA CTGGCAATGG TTCCGGTGAC
CCAGATTCTG GCGATTCCGG AGACGGTGAT CCAGACGCAG AGGGCCGCGA ATGA
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| Protein sequence | MSLKLTSAQR GFTLLEMLIA IAIFAMIGLA SNAVLSTVLT NDEVTRTFST RLKALQQGFG
AIERDLAQMV ARTPRLLEGG RGSTVFQTGN DILDSESEAL VFYRLGWLNP DGLLPRGSLQ
SVAYVVHEGR LERWYFPYPE PEFGAEPIKT VVIDKVLSVE YSFFMDDKWE RKVEATKLPK
AIAMEIEIEG LGKIQRKFLL PLGAAAPDKS KDEDNKDENP DDANKDKNDD GSGTGNGSGD
PDSGDSGDGD PDAEGRE
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