Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0155 |
Symbol | |
ID | 5369418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 184297 |
End bp | 185070 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640828343 |
Product | general secretion pathway protein J |
Protein accession | YP_001364389 |
Protein GI | 152998708 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR01711] general secretion pathway protein J [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTAA AACTGACTAG TGCGCAGCGG GGATTTACCC TACTAGAAAT GCTGATCGCC ATCGCGATTT TCGCCATGAT AGGTTTGGCT TCTAATGCCG TGCTCAGCAC TGTGCTGACT AACGATGAAG TGACGCGCAC TTTCTCTACT CGGCTTAAAG CCCTGCAGCA AGGCTTTGGT GCGATTGAGC GTGATCTCGC CCAAATGGTG GCGCGTACAC CCAGATTACT CGAAGGGGGT CGAGGTTCGA CCGTCTTCCA AACGGGCAAT GATATCTTAG ACTCGGAATC AGAAGCCTTA GTGTTTTACC GTTTAGGTTG GTTAAATCCC GACGGTTTAT TACCGCGGGG CAGCTTACAG TCTGTGGCGT ATGTGGTGCA CGAAGGGCGA CTGGAGCGTT GGTATTTTCC TTATCCTGAG CCTGAATTTG GTGCCGAGCC GATTAAGACA GTGGTCATAG ATAAAGTATT GTCGGTGGAA TATTCCTTCT TTATGGATGA CAAGTGGGAG CGCAAAGTCG AGGCGACTAA ATTGCCTAAA GCGATCGCCA TGGAAATTGA GATTGAAGGC TTAGGCAAGA TCCAACGTAA GTTCTTGTTA CCGCTAGGCG CTGCTGCACC TGACAAGTCC AAAGATGAAG ACAATAAAGA CGAAAATCCG GACGATGCTA ACAAAGATAA AAATGACGAC GGCAGTGGAA CTGGCAATGG TTCCGGTGAC CCAGATTCTG GCGATTCCGG AGACGGTGAT CCAGACGCAG AGGGCCGCGA ATGA
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Protein sequence | MSLKLTSAQR GFTLLEMLIA IAIFAMIGLA SNAVLSTVLT NDEVTRTFST RLKALQQGFG AIERDLAQMV ARTPRLLEGG RGSTVFQTGN DILDSESEAL VFYRLGWLNP DGLLPRGSLQ SVAYVVHEGR LERWYFPYPE PEFGAEPIKT VVIDKVLSVE YSFFMDDKWE RKVEATKLPK AIAMEIEIEG LGKIQRKFLL PLGAAAPDKS KDEDNKDENP DDANKDKNDD GSGTGNGSGD PDSGDSGDGD PDAEGRE
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