Gene Shew185_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0154 
Symbol 
ID5370560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp183948 
End bp184316 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID640828342 
Productgeneral secretion pathway protein I 
Protein accessionYP_001364388 
Protein GI152998707 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG TTAAGGGCAT GACTTTACTC GAAGTGATTG TGGCCCTTGC CGTGTTTTCG 
ATTGCGGCCG TGTCGATCAC TAAAAGTTTG GGCGAGCAGA TGGCCAACAT GCCGATTCTG 
GAATCGCGCA CTTTGGCACA GTGGGTGGCC GATAATCAGA TGGTCGATGC CAGACTCGAG 
CCGCAGTTTC CTGAAATCGG TAAAAAAGAA GGCCAAGTTG AACTCGCAGG AAAGGATTGG 
TATTGGCGTA AAGAAGTGGT GAAAACCACG GACGATAATT TTCGTATGAT CCGCATAAGC 
GTGAGTGAAG ACGAACGATA TCAGCGTATT GCAGCACAAG TGAGCAGTTA TGTCCTTAAA 
ACTGACTAG
 
Protein sequence
MKRVKGMTLL EVIVALAVFS IAAVSITKSL GEQMANMPIL ESRTLAQWVA DNQMVDARLE 
PQFPEIGKKE GQVELAGKDW YWRKEVVKTT DDNFRMIRIS VSEDERYQRI AAQVSSYVLK 
TD