Gene Shew185_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0146 
SymbolhslO 
ID5369587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp175506 
End bp176366 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID640828334 
ProductHsp33-like chaperonin 
Protein accessionYP_001364380 
Protein GI152998699 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAG ATACTTTACA CCGCTACTTG TTCGACAATG CCGATGTGCG TGGTGAACTG 
GTGCAGTTAC AAGACAGCTA TCAACAAGTG ATCAGCGCCC AAGAATATCC AGCCGTACTG
CAAGTATTAC TGGGTGAATT AATGGCGGCC ACCTCACTAT TAACGGCGAC ATTGAAATTT
AGCGGCGATA TCAGCGTGCA GTTACAGGGC AATGGTCCTG TTTCTTTAGC TGTGATCAAC
GGTAACAATC TACAAGAGCT ACGCGGCGTG GCTCGCTGGA ATGCAGAACT CGCCGATGAT
GCCAGCCTTA CCGATCTTTT CGGTCAGGGC TATATGGTCA TCACCTTAAC ACCCGACGAA
GGTGAACGCT ACCAAGGTGT GGTCGCACTC GACAAGCCAA CGCTAGCGGC CTGTGTTGAA
GAATACTTCA ATCAATCTGA ACAGTTACCA ACAGGCATTT GGTTATTTGC CGACGGCAAA
CAAGCGGCGG GCATGTTCCT ACAAATTCTG CCAAGCAAAG AAGATCACAA CCCAGACTTC
GAACACTTGA GCCAACTGAC ATCGACTATC AAGGCCGAAG AGCTGTTCAC ACTCGACGCT
GAAAGCGTGT TACATCGCCT ATATCATCAG GAAGAAGTGC GCCTATTCGA TCCTATCGAT
GTGAGCTTTA AGTGTACTTG CTCCCATGAA CGCAGTGCCG GCGCGATCAA GACCTTAGAT
CAAGCTGAAA TCGAAGCCAT TCTCGCCGAA GACGGCAAGA TCGAAATGGG CTGCGAATAT
TGCCACGCAA AATACATTTT TGATGCCATA GACGTAGCGG CATTATTTGC GAACGGTCAG
ACGTCAACAA CCCAGCAATA A
 
Protein sequence
MNQDTLHRYL FDNADVRGEL VQLQDSYQQV ISAQEYPAVL QVLLGELMAA TSLLTATLKF 
SGDISVQLQG NGPVSLAVIN GNNLQELRGV ARWNAELADD ASLTDLFGQG YMVITLTPDE
GERYQGVVAL DKPTLAACVE EYFNQSEQLP TGIWLFADGK QAAGMFLQIL PSKEDHNPDF
EHLSQLTSTI KAEELFTLDA ESVLHRLYHQ EEVRLFDPID VSFKCTCSHE RSAGAIKTLD
QAEIEAILAE DGKIEMGCEY CHAKYIFDAI DVAALFANGQ TSTTQQ