Gene Shew185_0140 details

Gene Information

• Locus tag: Shew185_0140
• ID: 5370239
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 166381
• End bp: 167163
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640828328
• Product: putative lipoprotein
• Protein accession: YP_001364374
• Protein GI: 152998693

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACTAC GCCCATTTAT ATTCACCCTC GCTTTTATAT TGGTGTTTAC CGCAGGGGTA 
TCGCTCACTG GCTGCATTAT TAATGTCAAC GCCGCTGGCA TGCCGGATTT AGACCACCAG 
CAACGCGAAC TCACACTCGA TAGCCAAGAC TTGCAAGGCC TGATTGCCGA GACTGGCGCA 
GGCAGCCTCG AAATTATCGG TGTCGAAGGC CTAACCCAAA TTAAACTCGT CGCCGACATC 
TATAGCAATA AAGACAGCAA CGACAGCAAA CTCATTCTTA CCCTTGAGAA AAAGGCCAAC 
AAGGCCAAGC TCAAAGCCGA TTTTGAACAA AGCGGTTTTA ATAATTACTC ACCCTACATC 
GACCTAAAAC TGCAAGTGCC TGCGAATTTA GCACTGGATA TCGATGACGG CTCAGGCGCC 
ATTTTGATCA GCAAGATGAC AGCAGATATC AATGTCAAAG ACGGTTCAGG TGAACTCATC 
ATTAACGGCG GTAACAATGT CAGCATTGAT GATGGTTCAG GGGACATTGA AGTCAGTCAA 
ATCAACGGCA ACCTCACGAT TGACGATGGC TCTGGCGCAA TCAAGGTGAC TGATATTCGC 
GGCAATATCG CCATCGATGA TGGTTCAGGC AACATTGAAG TCGCCAATGT GCAGAGTCCA 
GTGACCATCA CAGATGGCTC AGGCGACATT AATGTCTTTA ACACTAAGGG ATTAACGATT 
CTTGCGGCAG GTTCTGGCGA TGTGAAATTT AACAAAATCG ACGGCCCAGT AAGCATGGAA 
TAA 

 

Protein sequence

MSLRPFIFTL AFILVFTAGV SLTGCIINVN AAGMPDLDHQ QRELTLDSQD LQGLIAETGA 
GSLEIIGVEG LTQIKLVADI YSNKDSNDSK LILTLEKKAN KAKLKADFEQ SGFNNYSPYI 
DLKLQVPANL ALDIDDGSGA ILISKMTADI NVKDGSGELI INGGNNVSID DGSGDIEVSQ 
INGNLTIDDG SGAIKVTDIR GNIAIDDGSG NIEVANVQSP VTITDGSGDI NVFNTKGLTI 
LAAGSGDVKF NKIDGPVSME