Gene Shew185_0134 details

Gene Information

• Locus tag: Shew185_0134
• Symbol: ribB
• ID: 5369424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 159989
• End bp: 160642
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640828322
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase
• Protein accession: YP_001364368
• Protein GI: 152998687
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGT CTTTACTTGC TCCTTTTGGT ACTGCTATCG AACGCGTTGA AGCGGGTCTT 
AATGCCCTGC GTCAAGGCCA AGGTGTGTTA GTTGTCGATG ACGAAGATAG AGAAAACGAA 
GGCGATTTAA TTTTCGCTGC CGAGACACTG ACTAACGCCC AAATGGCCAT GCTCATCCGT 
GAATGTAGCG GTATTGTTTG CCTATGTTTA CCCGATGAAA AAATCAAAGC CCTCGAACTG 
CCTGCGATGG TCGAGCACAA CTCGAGCCAA TACGGCACGG CATTTACTGT GAGCATTGAA 
GCAACTGTCG GTGTAACGAC TGGGGTTTCT GCCGCTGACC GCGTGACCAC CATTAAAGCG 
GCGATTGCCG ACAACGCTAA GCCAAGCGAT CTCGCTCGCC CAGGCCATGT GTATCCACTT 
CGCGCCCAAC CGGGCGGCGT GCTAACCCGC CGCGGCCACA CCGAAGGCAC GATCGATTTA 
GTGCAACTCG CTGGCTTAAA ACCCGCTGGC GTGTTGTGTG AAGTCACTAA TCCCGACGGT 
ACTATGGCGC GTTTACCCGA AATTATCGCC TTCGGCGCAC TGCACAATAT GCCTGTGCTG 
ACGATTGAAG ACATAGTGGT CTACCGTAAA TCGCTACTGG CGAAAGTCGG TTAA 

 

Protein sequence

MNQSLLAPFG TAIERVEAGL NALRQGQGVL VVDDEDRENE GDLIFAAETL TNAQMAMLIR 
ECSGIVCLCL PDEKIKALEL PAMVEHNSSQ YGTAFTVSIE ATVGVTTGVS AADRVTTIKA 
AIADNAKPSD LARPGHVYPL RAQPGGVLTR RGHTEGTIDL VQLAGLKPAG VLCEVTNPDG 
TMARLPEIIA FGALHNMPVL TIEDIVVYRK SLLAKVG